Papaver somniferum (opium poppy): 113290246
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Entry
113290246 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113290246
Membrane trafficking [BR:
psom04131
]
Protein recycling
Others
EARP complex
113290246
Endosome - Golgi transport
Tethering complex
GARP complex
113290246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
COG7
MUN
HemX
Motif
Other DBs
NCBI-GeneID:
113290246
NCBI-ProteinID:
XP_026395629
LinkDB
All DBs
Position
6:complement(177985753..177997616)
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AA seq
829 aa
AA seq
DB search
MDKSGALEYINQMFPTEASLPGVEPLIQKIQSEISRVDAGILTAVRQQSNSGTKAKEDLA
AATSAVQELMHKIREIKTKAEQSETVVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKINELREKFKNIKQILKSHVFSD
FSSLGTGKETEEANLLQQLSDACLVVDALEPSVREELVKNFCSRELTSYRQIFEGAELAK
LDKAERRYAWIKRRLRTNDEIWKIFPSSWHVAYLLCIQFCKLTRTQLEDILDNLKEKPDV
GTLLLALQRTIEFEDELAEKFSGGTWNREAGNDVEDVNKGESNNQAVIDIRKKYEKKLAS
HQGSGSEEKDGHKDLSVPGAGFNFRGIISSCFEPHLIGYVELEEKTLMETLEKLVQDETW
DTEEGSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLFNLFKVFQRILRTYATKLFARLP
KGGVGIVAAATGTDGQIKTSDRDERVICYIVNTAEYCHKTSGELAENVAKIIDSQYADKV
DMSDVQGEFSTVITRALLTLVQGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNSINLIL
NSSIPVLGSLLTPIYFQFFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTIL
LDIPSLGRTQTTSASSYSKFVSREMSKAEALLKVILSPVDSVSDTYRALLPEGTPSEFQR
ILELKGLKKADQQSILDDFNKNRSGVTQPSVVVQSVVPAAPTSPAVVAAAAAAAGNAIST
MGIASREDVLTRAAALGRGAATTGFKRFIALTEAAKDRKDGPFRKLFSP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcaggtgcactggagtacatcaaccagatgttccctacagaagcatcttta
cctggagtggagccacttattcaaaagattcagagtgagattagtcgtgttgatgcaggg
atactgactgcagttcgccaacagagcaattctggtactaaagccaaagaagatcttgct
gcagctacaagtgctgttcaggaactcatgcataagatccgagaaataaaaaccaaggcc
gagcaaagtgaaaccgtggttcaagaaatttgtcgtgacatcaaaaagctggattttgca
aagaagcacataacaactacaatcactgctcttcatcgacttacaatgctcgtctcagct
gttgagcagcttcaagtaatggcttcaaagcggcaatacaaggaagcagcggctcagttg
gaggcggtaaaccagttatgcagtcattttgaggcctatagagatgttccgaagattaat
gagcttagagaaaagttcaaaaacatcaaacaaatactcaaatctcatgtattctcggat
ttctcaagcttaggtacagggaaagagacagaggaagccaatttattgcaacaattatct
gatgcttgcttagttgttgatgctttggagccttctgtaagggaagaattggtgaaaaac
ttttgcagtagggagcttacttcataccgtcagatctttgaaggagctgaattagccaag
ttggataaagctgaacggagatatgcatggatcaaacggcgtttgcgaacaaatgacgaa
atttggaagatctttccttcttcttggcatgttgcgtacttgctttgtatccagttttgt
aaattgacaagaacacaacttgaggacatactcgataatctcaaagaaaagcccgatgtt
ggaactctgttgttggcattacaaaggacgattgagtttgaggatgagttggctgaaaaa
ttcagtggaggcacttggaatagggaagctgggaatgatgttgaggatgtaaataaagga
gagagtaataaccaagctgtaatagacattcgaaagaagtacgaaaagaagcttgcttca
catcaagggagtggttcagaggaaaaggatggccataaagacttatcggttcctggagct
ggattcaacttccgagggattatctcatcttgctttgaacctcacctgattggatatgtc
gaactggaggagaaaacactaatggagaccctggaaaaacttgttcaggatgaaacttgg
gatacggaggagggaagtcagacaaacattttatcaagtagcatgcaggtgtttctgata
atcaggagaagcttgaaaagatgcagtgcattgacgaagaaccaaacgttgtttaatctg
tttaaggtgttccaaaggattcttagaacatatgccactaaacttttcgcaagattacca
aaaggtggagtggggatagtggcagccgctactggtactgatgggcagatcaagacttct
gacagggatgaaagggtgatttgctatatagtgaatactgcagaatattgccataaaacg
tctggtgaactagctgaaaacgtggcaaaaatcattgattctcagtatgcagataaggtg
gatatgtcggatgtgcagggtgaattctcaacagtaataactagagcgttgctgacgtta
gtgcaaggtttagaaaccaaatttgatgctgaaatggctgcgatgacacgtgttccatgg
ggtacacttgaaagtgttggtgaccaatcagagtatgtcaatagcataaatttgattctt
aatagcagcattcctgtgctcggaagtttgttaactcccatttacttccagtttttctta
gacaagcttgcagcttctttgggtccacgcttctacctcaacatttacaagtgcaaacac
atatcggagaccggagcacaacagatgctgctggatactcaggctgtaaagacaatcctt
ttggatattccttctttgggaagaactcagacaacaagtgcctctagctactcaaaattc
gttagtcgtgagatgagcaaagctgaagcactgttgaaggttattctatctcctgttgat
tctgtcagcgatacttacagagctctgcttccagagggaacaccttcagaatttcaaaga
attctcgagcttaagggcctgaagaaagcagatcagcaaagtatactggacgacttcaat
aagaacagatccggggttacccaaccatcggttgttgttcagtcagttgtgccggcagca
ccgacatcccctgctgttgttgctgcagcagcagcagcagctggtaatgcaatctcaacc
atgggtattgcttctcgtgaggatgtgttaactcgagcagctgcacttggaagaggtgct
gcaacaactggtttcaaaagattcattgccctaacagaggcagccaaggataggaaagat
gggcctttccgcaagctttttagtccatga
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