Papaver somniferum (opium poppy): 113290262
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Entry
113290262 CDS
T05758
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00450
Selenocompound metabolism
psom00970
Aminoacyl-tRNA biosynthesis
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
113290262
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113290262
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113290262
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113290262
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
113290262
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class I (U)
113290262
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113290262
Prokaryotic type
Other AARSs
113290262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
FMN_red
Motif
Other DBs
NCBI-GeneID:
113290262
NCBI-ProteinID:
XP_026395644
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All DBs
Position
6:complement(178541006..178546413)
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AA seq
638 aa
AA seq
DB search
MSGRVFRNSQNTLWLFSSLTSPSTTTSSIKFKTTCIKNVFLNRRNVLSFSPKPSSSSSAL
FCSCSSNDGGAQSITPDAFILTTPLYYVNAPPHMGSAYTTIAADAIARFHRLLGKKVIFI
TGTDEHGEKIATAAAASGSSPIEHCSNMSQAYKFLWKDLDIAYDKFIRTTDSSHEEIVKE
FYARVLASGDIYRADYEGLYCVGCEEYKDEKELLENNCCPMHLKPCEARKEDNYFFALSK
YQKSLEEVLARNPDFVQPSYRLNEVQSWIKSGLRDFSISRASVDWGIPVPCDEKQTIYVW
FDALLGCVIYVYFSCLLLRYVSALSLEQEKPTLQHATASGWPASLHLIGKDILRFHAVYW
PAMLMSAGLSLPKMVFGHGFLTKDGMKMGKSLGNTLEPKDLVLRFGSDAVRYFFLREVEL
GNDGDYSEERFVNIVNAHLANTIGNLLNRTLGLLKKNCNSTLIVDSVTAAEGIALKDTVE
KLVETSKDHYENLSLSLACEAVLEIGNAGNLYMDERAPWSLFKKGGDASEAAAKQDLVVI
LEVVRIIAVALAPVTPSLCSRIYSQLGYSNDQFEAVTWSDTRWGGLKGGQVMAQAIPIFA
RIEIISEEENGGETLKKAVKDKKRKPKPKPQLAVEAQS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagagtattccgcaactcacaaaatactctctggttattctcttcattaact
tctccttctactactacctcttcgatcaaattcaaaactacctgtataaaaaatgtcttc
ttaaatcgcagaaatgttctttccttctcgccaaaaccttcgtcatcttcatctgcctta
ttctgtagctgcagcagtaacgatggtggagctcaatccatcactccagacgcattcatt
ctcactacacctctttactacgtaaatgccccacctcatatgggtagtgcctacactact
attgctgctgatgccatagctcgatttcacagactgttagggaagaaagttatattcata
acgggtacagatgaacatggagagaagatagctactgcagcagcagctagtggttcgagt
ccaattgaacattgcagcaatatgtcacaggcttataagtttctttggaaggatctagac
atagcttatgacaagtttattcgaacaactgattcaagtcacgaagaaattgtgaaggaa
ttttatgctagagttcttgctagtggtgacatttatcgagctgattatgagggactgtat
tgtgttggttgtgaagagtataaggatgagaaggaattgcttgagaacaattgttgccct
atgcacctaaaaccttgtgaggcacgtaaggaggataactacttctttgccttgtcaaaa
tatcaaaagtcactagaggaggtcttagcacgtaatccagattttgtacagccttcttac
cgtttgaatgaggtgcaaagctggatcaagagtggcttaagagatttctcaatttcacgg
gcgtctgtggattggggtattcctgtgccttgcgatgaaaaacaaactatctatgtctgg
tttgatgctttattggggtgcgttatttacgtatacttctcttgtttgctgcttagatat
gtatcggcattatccctagaacaagaaaaacccactttacaacatgcaactgcttcaggt
tggcctgcttcgctgcacttaattggcaaggatatcttgcggttccatgctgtttactgg
ccagctatgttgatgtctgctggactaagccttccaaagatggttttcggccatggattc
ctaaccaaggatggcatgaaaatggggaaatcacttggtaatacactcgagccaaaggat
ttggtgcttaggtttggttctgatgcggtgaggtacttctttcttagggaagtagaactt
ggaaatgatggggactactcggaggaacggtttgtcaatattgtcaacgcacatcttgcc
aatacaataggaaatcttcttaatcgtacgcttgggcttctgaagaaaaactgtaattca
actttaatcgttgattcggttactgcagctgaagggattgcactcaaagacactgtagag
aagttggtagagacatcaaaagaccactatgaaaacctatccttatccttagcttgtgag
gccgtgctagagattgggaacgcagggaacttgtatatggatgaacgggctccatggtct
cttttcaagaaaggtggcgatgcttctgaagctgctgcaaagcaggaccttgttgtaata
ttggaagtcgtgaggattattgcagtagcattagctcctgtaaccccaagtttatgttcg
cggatatattcacagcttggctattcaaacgatcagtttgaagctgttacctggagtgat
accagatggggagggctcaaaggtggtcaggttatggcccaggcaattcccatcttcgcg
aggattgaaatcatctcagaagaggaaaatggaggtgaaactcttaagaaggcagtgaaa
gataagaaacggaaaccaaagccaaagcctcaactggctgtagaagctcagagttag
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