Papaver somniferum (opium poppy): 113290931
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Entry
113290931 CDS
T05758
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113290931
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113290931
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Glyco_hydro_28
VIR_N
Motif
Other DBs
NCBI-GeneID:
113290931
NCBI-ProteinID:
XP_026396299
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Position
6:complement(73847889..73850097)
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AA seq
389 aa
AA seq
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MENPFPLLLLSILTVLAKQTFASSLEEASTIVSSYGQPKIKLNKIDYCWRAKLLIWSANR
RALAECAVGFGKEAVGGTHGATYIVVDSSDDPINPKPGTLRYGAVQKEPLWIMFNKDMVI
ILKTELMINSFKTIDGRGVNVEVAYGPCIVMHNVNNIIIHGIRIHDCVPGKQEIVLSSPG
HIVHRLRDGDGVDIFNSSHIWIDHCYLARCTDGLIDVIHGSTAITISNNYFTQHDKVMLL
GHNDHFKGDKVMKVTLVFNHFGPGLVQRMPRVRRGYAHVANNRYDEWLMYAIGGSANPTI
LSEGNYFTASNNSGIKEVTKRESDSGWKQWKWRSYNDEFQNGAFFVESGWGNCAPNYTQS
QTFKVYKGSMVPTLTSYAGPLRCTAGYRC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatccattccctcttttacttctttcaattctaacggttttggctaaacaaaca
tttgcttcttctttggaagaagcttcaaccattgtatcaagctatggacaacctaaaatc
aaactgaacaaaatagactattgttggagagccaaactactaatatggtcagcaaatcgt
cgtgccttagctgaatgtgctgtagggttcggcaaggaagctgttggaggtacacatggt
gcaacatacattgtcgtagactcgtcagatgatccgatcaatccgaaacccggtacactt
cggtatggcgcagttcaaaaggaaccactatggataatgtttaacaaggatatggttata
atattgaaaactgaactgatgataaacagtttcaaaactatagatggaagaggagttaac
gtggaagttgcttatggaccttgtattgttatgcacaatgtaaacaacataataatacat
gggattcgtattcatgattgtgtgccaggaaaacaagaaattgttctcagctcaccgggg
catatagtccatcgattacgagatggtgatggagttgatatatttaactcctcacatatt
tggattgatcattgttatcttgcaagatgtacagatggtcttattgatgtcatccatgga
tccactgccattacaatttcaaacaactacttcactcagcatgacaaggtgatgttacta
ggccacaacgatcatttcaagggtgacaaggttatgaaagttacattagtcttcaaccac
tttggccctggtttagtgcagaggatgccaagagtaagaagggggtatgctcatgttgcg
aataataggtacgatgagtggttgatgtatgccattggtgggagtgcgaatcctacaatc
ttaagcgaagggaactactttactgcatccaacaattccggcatcaaagaggtaaccaag
agagagagtgatagtgggtggaaacagtggaaatggaggtcatataatgatgaattccaa
aatggagctttttttgttgaatccggttggggaaattgtgctcctaactacactcaatct
cagacattcaaggtttataaaggatcaatggtgcctactctaacatcatatgcaggtcct
ctgagatgtacagctggataccgatgttaa
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