Papaver somniferum (opium poppy): 113290986
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Entry
113290986 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113290986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113290986
Membrane trafficking [BR:
psom04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
113290986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
113290986
NCBI-ProteinID:
XP_026396354
LinkDB
All DBs
Position
1:complement(75262738..75271062)
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AA seq
790 aa
AA seq
DB search
MIGDGIEDEEKWLSEGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETKRGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTGMDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERNELRDLVGKNLHVLSQIEGVDLDMYKDTVLP
RILEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLETLLGSCPQLQATVDIKTVLSQLMD
RLSNYAASSGEALPEFLQVEAFAKLSNSIGKVIEAQVDMPVVGAISLYVSLLTFTLRVHP
DRLDYVDQVLSACVKKLSSKAKLEDSRATKQIVALLSAPLEKYNDIGIALKLSNYPPVMD
HLDSATNKVMAVVIIQSIMKNNTCISTADKVDALFELIKGLIKDLDGTPVEELDEEDFKE
EQSSVAGLIHMLHNDDPEEMLKIICTVKKHILTGGPQRLPFTVPPLIFSALKLVRRLQGQ
DGDVVGEDQAATPKKIFQLLHQTIEALLSVPAPELALRLYLQCAEAANDCDLEPVAYEFF
TQAFILYEEEVADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDDQEGLKDGERVLLCLKRALRIANAAQQMASATRGSGGPVTLFVEILN
KYLYFFEKGNPQITSTAIQGLVELINTEMQSDTTASDSSADAFFSSTLRYIEFQKQKGGT
MGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcggagacggaatcgaagatgaagagaaatggttatctgaaggaattgcaggtctt
cagcaaaatgccttttacatgcatcgagccctggattcgaataatttgagagatgccttg
aaatattctgcccagatgttatctgagcttcgtacatcaaggctttcacctcataaatac
tatgagctttatatgcgagcttttgatgaattaaggaagttggagatgttcttcaaggag
gagaccaagcgtggttgctctgttatcgatttatatgagcttgtacaacatgctggcaac
attttacctagactgtatctcctctgtacagtaggatcagtgtacataaaatcgaaggaa
gctcctgccaaggatgttctcaaggaccttgtagaaatgtgtcgtggaattcaacatcct
gtacgtgggttatttctacgaagctacctttcccaagttagtagggacaagttacctgac
attggttctgagtatgaaggtgatgctgatactggcatggatgctgttgagtttgtgctt
caaaattttactgagatgaataaactttgggtccggatgcagcatcagggacctgccagg
gaaaaggagaagcgggaaaaagaaaggaacgagcttcgggatctggttgggaaaaactta
catgtcctcagtcaaatagagggtgtggaccttgatatgtataaagatactgtgcttcct
agaatcctggagcaggttgtcaactgtaaagatgagattgcccagtattatctaatggat
tgcattatccaagtcttcccagatgagtaccacttgcagacgttagagacattattgggt
tcctgccctcaacttcaggctacagttgacatcaagacagtgctatctcagttgatggat
aggttatctaactatgctgcttcaagtggggaggcgctacctgaatttttacaagtagag
gcttttgctaaactgagcaactcaattggaaaggtcatcgaagcacaggtggacatgcct
gtggttggagctattagcttatatgtttctcttcttacttttactctgcgtgttcatcct
gatcggcttgattatgtggatcaagtattgtctgcatgtgttaaaaaactctcgagcaag
gctaaattggaggacagcagagcaacaaaacaaattgttgcacttttgagtgctcccctg
gagaaatacaatgatattggcattgcactaaagctttccaactatccccctgtcatggat
cacctagatagtgcaactaataaagtcatggcagtggttatcatacaaagcatcatgaag
aacaacacttgcatttcaactgctgataaagttgatgcattgtttgaattgatcaagggg
cttataaaggatttggatgggacccctgtggaagagcttgatgaggaggatttcaaggag
gagcaaagttcagttgctggtctcattcacatgctgcacaatgatgaccctgaagagatg
ttgaagatcatatgtactgttaagaagcatatactgactggaggaccacaacggcttcct
tttactgttccccctctaatattttctgcactcaagttggtcaggcggttgcaaggtcag
gatggggatgtagttggagaagatcaggcagcaacacctaagaaaatctttcagctcttg
catcagacaatcgaggctctattatctgtcccagctccagaactggctttaagattgtac
ttgcaatgcgcagaggctgcaaatgactgtgatcttgaacctgttgcatatgagtttttc
actcaagcattcatactatatgaagaagaagttgcggattcgaaggcccaggtgactgca
atacatctcataattggaactcttcaaaggatgaatgtatttggcgttgagaatagggat
actctgacacataaagcaactgggtattccgcaaagcttttaaagaagcccgaccaatgc
agagctgtttatgcgtgttcgcatctcttttggctagatgatcaagaaggtttgaaggat
ggagaaagggtcctgctttgcttaaagcgtgcattaagaattgcaaatgctgcacaacag
atggcgagcgctacacgtggtagcggtggaccagtcacactttttgttgaaatattgaac
aagtacctgtactttttcgagaaaggaaaccctcaaatcacaagcactgcaatccagggt
ttggttgaattgatcaatacagagatgcaaagtgacacaacagcatcagattcatctgct
gatgcattcttttcgagcacactacggtacatcgaattccagaagcaaaagggtggtaca
atgggtgaaaagtatgagccaatcaaggtgtga
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