Papaver somniferum (opium poppy): 113291653
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Entry
113291653 CDS
T05758
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113291653
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113291653
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
113291653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
PHF5
FANCL_C
Prok-RING_1
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
113291653
NCBI-ProteinID:
XP_026396950
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All DBs
Position
6:complement(149319392..149320018)
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AA seq
208 aa
AA seq
DB search
MSSSFSSRKLLLQTIPRISTGSPISPHAGTKEPESNIDANVIMVLSVLVCALICVLVLNS
IVRCALGYSNRLARDSGDNRPIQSVANTGIKKKALKTFTVVTYSSGGLKLPSLDTECVIC
LSEFAQSERIRILPKCNHGFHIKCIGKWLSSQSTCPTCRHCLIETCEKIINGGSSQPRPL
IPLPQPPHSSTIVPLEHEGITQNFADIC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttctttttcatcaaggaagctacttctgcaaactattcctcgcatatcaaca
ggctcacctatctccccacatgccggtacaaaggaacccgagagtaatattgatgcaaat
gtaattatggttctttcagtgcttgtatgtgcactgatatgtgtactagtgcttaattcc
atcgttagatgtgcgttgggttactctaaccggcttgcacgtgattccggtgacaacaga
ccaattcagtcagttgctaacacaggaataaagaaaaaggctctcaagacatttaccgta
gttacttactcatctggcgggttaaagcttccgagtttagacactgaatgcgttatatgt
ctctcagagtttgctcagagtgagcgaattagaattctacctaaatgcaaccatgggttt
catattaaatgcatcggtaaatggctcagttcgcagtcaacctgcccaacttgcaggcat
tgtttgattgagacgtgcgaaaagatcatcaatgggggcagcagccaacctaggcctttg
attccgctgccacagcctccacattcatcaaccattgttccattagaacatgaaggaatc
acacagaatttcgcggacatatgttga
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