Papaver somniferum (opium poppy): 113291737
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Entry
113291737 CDS
T05758
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113291737
Enzymes [BR:
psom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
113291737
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113291737
Prokaryotic type
113291737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
VIR_N
DUF2344
Motif
Other DBs
NCBI-GeneID:
113291737
NCBI-ProteinID:
XP_026397021
LinkDB
All DBs
Position
1:complement(80589113..80591221)
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AA seq
518 aa
AA seq
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MDESITTTTSPSSSSPPPPPPPPEEPEPKKLKMSTTTSDDETTNTDPNSIDRKPRYKRRK
IAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWARSARTDKG
VSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRRRYVYLIPV
FALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTLEVDGIDVV
AQTETTEIESGFVLNNDGTENENVELESKASGVEVLAEIGGSEEVGSGLVQNSNGDGKAG
KKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGV
DFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLD
ECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYPHIGSTELKEGSVGIWLHSLNHRN
YPDLNYLEANKVGNNGLAEESAAVPSVPVESAPIESVA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatccattactactactacttcaccttcctcatcttctcctcctccaccacca
ccaccaccagaagaacctgaacctaagaaactcaaaatgtccaccaccacctcagatgat
gaaacaaccaacacagacccaaactctatagatcgaaaacctagatacaaacgtcgcaaa
attgcaatattcttagcttactgtggtgttggttatcaaggcatgcagaaaaacccagga
gctaaaaccattgaagctgatttagaagaagccctttttcaatctggtggtattccagaa
cctgaccgtggaaaccctaaacgattcgattgggctcgttctgctcgtactgataagggt
gttagtgctgttggtcaagttgtttctggcaggttctatgttgatcctcctggctttatt
gatcggcttaattcacatcttcctgatcaaattcgagtatttgggtttaagcgagttacg
aattcgtttagttcgaagaagttttgtgatcgaaggaggtacgtttacctgattcctgtt
tttgctttagactctaatgctcatcctgatagagaaagtgtgttagctagtttaggttct
gaaaatgaactttccaagtgtttggagtgtcctgatagaggtagaaaggtgctaggtgta
atgggtaaacgtaaaatcattgaatccaaaacattagaagttgatgggatcgatgttgtt
gctcaaacagaaacaactgaaattgagtctgggtttgttttgaataatgatggtactgaa
aatgagaatgttgagttagaatctaaagcttcaggagtggaagtattggcggaaattggg
ggttccgaggaagtgggttcgggcttggttcaaaatagtaatggggatgggaaggctggg
aaaaagagtgtgttcagctatggtgagaaggagaaagagaagtttaatagaattctaggt
cgttatgtgggaactcataatttccataacttcacaacaagaacgaaagctgaagaccca
gctgcaaaacgcttcattatatcgtttgacgcgaataccgttgttaatgttgaaggagtg
gattttgttaagtgcgaggttgtgggacagagtttcatgcttcatcagatcagaaagatg
gttgggcttgcagttgctgtcatgaggactggtgcaccagagtcattgattgatgtagcc
ctacaaaaggatgtgaattttacagctcctacagctcctgaggttggtctatacctggat
gagtgtttcttcacttcgtataaccagaagtggaaggatacacatgaagagatttcaatg
aaagattatgctgaagaagctgaggatttcaaaatgaaacaaatatatcctcacattgga
tcaacagaactgaaggaaggatctgtaggtatctggttacattctctaaaccaccgcaat
tatcctgatttgaattatctagaggccaataaagtcggcaataatgggctagcagaagaa
agtgctgcagttccaagtgttccagttgaaagcgctccaattgaaagcgtcgcatga
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