Papaver somniferum (opium poppy): 113292778
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Entry
113292778 CDS
T05758
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113292778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113292778
03041 Spliceosome [BR:
psom03041
]
113292778
03032 DNA replication proteins [BR:
psom03032
]
113292778
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113292778
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
Sm proteins
113292778
U2 snRNP components
113292778
Complex B
U1 snRNP components
113292778
U4/U6.U5 tri-snRNP components
113292778
Complex C
U2 snRNP components
113292778
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113292778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
113292778
NCBI-ProteinID:
XP_026397422
LinkDB
All DBs
Position
7:82607039..82610915
Genome browser
AA seq
88 aa
AA seq
DB search
MATTRVQRIMTQPINLIFRFLQSKARIQIWLFEQKDTRIEGRIIGFDEYMNLVLDEAEEV
NIKKNTRKSLGKILLKGDNITLMQNTGK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgactactagagttcagaggattatgacccagcctatcaacctcatttttcggttt
ctccaaagtaaagcaaggattcagatttggctttttgagcagaaagatacgaggattgaa
ggcagaattattgggtttgatgagtacatgaatttggttcttgatgaggccgaagaagtc
aacatcaagaaaaataccaggaagtcattggggaagattcttttgaaaggagacaacata
acattgatgcagaatacgggtaaatga
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