Papaver somniferum (opium poppy): 113292856
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Entry
113292856 CDS
T05758
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113292856
Transcription factors [BR:
psom03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
113292856
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
bHLH_IRO3
bHLH_NPAS4
DUF948
CENP-F_leu_zip
DUF2813
SBP_bac_4HB
Syntaxin
CheZ
ApoLp-III
NleF_casp_inhib
Spc24
RBSN_mid
Cyanophycin_syn
ZapB
Motif
Other DBs
NCBI-GeneID:
113292856
NCBI-ProteinID:
XP_026397475
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All DBs
Position
7:complement(101268451..101269523)
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AA seq
94 aa
AA seq
DB search
MSSRSRSSRSRQSGGSRISDDQINDLVSKLQQLLPELRSRNSDKVSAAKVLQETCNYIRN
LHREVDDLSERLSELLATTDTSSAQAAIIRSLLM
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcagaagtcgatcatctcgttcaaggcagtcaggtggttcaaggatctcagat
gatcaaatcaatgatcttgtttccaagttgcaacaacttctccctgaacttcgtagccgt
aactctgacaaggtatcagcagcaaaggttctacaagagacgtgcaattacattagaaac
ttacacagagaagtcgacgacctaagcgaaagattatcggagcttttggcaacaacagac
acaagtagtgctcaagctgccattattaggagcttacttatgtag
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