Papaver somniferum (opium poppy): 113294057
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Entry
113294057 CDS
T05758
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113294057
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113294057
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
113294057
NCBI-ProteinID:
XP_026398266
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Position
7:complement(9817405..9821304)
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AA seq
702 aa
AA seq
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MSSVKVSCTCTLRYLLLLILINNYVCDASALSNPEDRVQLHVQDDHVVMDNGLVQVNISN
PFGLVTGVQYNGIDNLLENMNKFNHGGYWDLSWSQRGNKGTYFLMNGTSFKVIVQNETQV
EISFSRTWNSSASSSSSHHSDSNNSTDWVPLNFDIRYVMLKGLSGFYTYGIYEHENGMPD
FNLNTTRVAFKLRKDKFQYMAISKTRQRRMPLPEDRVPPRGEVLQFKEATLLVDPVVPEL
KGQVDDKYMYAQNNEDIKVHGWVSSEASDPLVGFWHITPSDEYRSGGPLRQELTSHVGPH
SLTVFLSSHYMGQAKLPMFGNGEPWKKVYGPVFLYLNSAPHGTNDSALWDDANEQLQQEA
QKWPYSFIASTDYPKSDQRGTVNGRILVRDRFVSKEDIPAVDAYVGLALPGEVGSWQTEC
KGYQFWTRAGPDGSFTIKNVHSGDYNLYAWVPGFIGDYKYGNLITVKAGDSIELDDDLVY
DPPRNGTTLWEIGIPDRTAAEFFIPDVDPKYVNPLYLKQDRYRQYGLWEQYSVLYPSTDL
VYTVNSSTYQKDWFYAQVTRKLGEKKYNSTTWQIKFNQDSVDQGTIYKLRVALASTHGAE
LQIRFNNLGTEIPHFTARGLNKDNAIARHGIHGLYLLINVDVKSDWLKDGENTIFLSQVR
GKGPWESIMYDYIRLEAPAEDERKNAEARLSGDLTQTRTNSF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtgaaagtttcgtgtacatgcacgttgcgttacttgttattgttaattcta
atcaacaattacgtatgcgacgcatctgctttgagcaatcctgaagaccgtgtacaattg
catgtacaagatgaccacgtggtgatggataatgggttagttcaagtgaatatatctaat
ccttttggattagtcactggagttcagtacaacggtatcgataacttgctagaaaacatg
aataagttcaatcatggagggtactgggatctgagctggagccaaaggggaaacaaagga
acatattttctgatgaatggaactagttttaaggtaatagttcaaaatgaaactcaagtt
gaaatttcgttctcaagaacatggaattcctcggcttcatcatcttcgtcacatcactca
gactcaaacaacagcacagattgggttcccctcaactttgacataagatatgtaatgtta
aaaggtttgtcaggattctatacatatggcatatatgagcacgaaaatggaatgccagat
ttcaatctcaatacaactagggtcgccttcaagcttcgtaaagacaagtttcaatatatg
gctataagtaagacacggcaaagacgaatgccactgccagaggatcgtgtaccaccaaga
ggcgaagtactacaattcaaagaagcaactcttcttgtagaccctgttgtgccagaacta
aaaggccaagtggatgacaagtacatgtatgcacaaaataatgaagacataaaggttcac
gggtgggttagctctgaggcctctgaccctctagtaggtttctggcatatcacaccgagc
gatgaatatcgaagtggtggtcctctaaggcaggaactcacctcacatgttggtcctcat
tctctcactgtgtttcttagttcccactatatgggccaggctaagttacccatgtttgga
aatggagaaccttggaaaaaagtgtatggtccagtattcctgtatcttaattcagctcca
cacggtacaaatgatagcgcattgtgggacgacgccaatgaacagctgcaacaagaagcc
cagaaatggccatatagtttcatagcttccaccgactatcctaaatctgatcaaagaggc
acagtcaatggaagaatactcgtccgtgataggtttgtaagcaaggaagatatacctgca
gtagatgcttacgttgggttagctttaccaggagaagttgggtcctggcagacggagtgc
aaggggtaccaattctggactagagctggtcctgatggttcattcacaattaagaatgta
cattctggagattataatctatatgcatgggttcctggcttcataggagattacaaatat
ggaaatctcattacagttaaagcaggagattccattgaattggatgatgaccttgtttat
gaccctccaagaaatggcactacgttgtgggagataggtattcctgacagaaccgcagcc
gagtttttcatcccagatgttgaccctaaatacgttaatccactatacttgaagcaagac
aggtacagacaatatggattgtgggagcagtacagtgttttatatccaagcacggacctt
gtttacacagtaaacagcagcacttaccagaaagattggttctacgcgcaggttactcgg
aagttgggagaaaaaaagtacaactcaacaacatggcagattaagttcaaccaagatagt
gttgatcagggcacgatttataagttgcgagtggcactagcttccacacatggagcagaa
ttgcagattcgattcaacaatttgggaacagaaattcctcatttcacagctcgaggactt
aacaaggataatgccattgcgagacatggaattcatggcctgtatctgttgattaatgtt
gatgtaaagagtgattggctcaaagatggcgaaaataccatttttctttcacaagttaga
ggtaaaggtccgtgggaaagcataatgtatgactatatacgtctcgaagcaccagcggag
gatgaaagaaaaaatgcggaagcaaggctttctggggatcttacccagaccagaacaaac
agtttttag
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