Papaver somniferum (opium poppy): 113294086
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Entry
113294086 CDS
T05758
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113294086
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psom01002
]
113294086
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113294086
Enzymes [BR:
psom01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113294086
Peptidases and inhibitors [BR:
psom01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113294086
Ubiquitin system [BR:
psom04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113294086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
UCH_1
MATH
RA_2
GMP_PDE_delta
Motif
Other DBs
NCBI-GeneID:
113294086
NCBI-ProteinID:
XP_026398294
LinkDB
All DBs
Position
7:complement(10881141..10884416)
Genome browser
AA seq
1091 aa
AA seq
DB search
MTQMTDPLPALDQEDTVMLVQDSEEVVDDPQPMEVTPAEEAVRAQAVEDPASSSTRFTWR
IENFSTLNTEKHYSDVFTVGTYNWRVVMYLKGKNVDHLSLYLEVADSDNLPYGWSRHAKF
SLAVVNQIHNKISMRKHHPEHQFTARENHMGFPSIMTLKLLHYPTAGYLVDDTCIIEAEV
AVNDSGNETGYVGLENQGATCYMNSLLQTLYHIPYFRKSVYHMPTTENDLESGSSIPLAL
QTLFYKLQYGKNSVSTKELTKSFRWNTHESFMQHDVQELNRVLCEKLEDKMKGTAVEGTI
QHLFEGHHMNYIECVNVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVEHLQGDNKYH
ADQHHGLQDAKKGVLFIDFPPVLQLQLKRYEYDFKRDMMVKINDRYEFPLQLNLDREDGK
YLSPDADRRVRNLYTLHGVLVHSGGGHGGHYYAFIRPTFSEQWFKFNDERVTKEDIKRIL
EEQYGGEAKISNAYMLVYIRESDRDEIMCEVDEKDIAEHLRMRLKKEQEEKEHKEKEEAE
AHLYTIIKVARNEDFSEQIGREIFFDLVDHKKVSSFRIRKKMPFTLFKEEVAKEFGVPVQ
FQRYWLWAKRLNHTYRPYRPLTLQEETQSVEKLREISNKAAGNEAWNNKELKLFLEIEIG
PELNPIPPPCHRKKEDILLFFKLYDAEKEEIRYVGRLLVKGSGKPLEILKKLNEMAGFSL
DEEIELYDEIKFEPTVMCDRVDKKLTFCDSKLEDGDIICFQKPASADSMTPYLYPDVPSF
LEYVHNRQVVHFRSLEKPKEDDFCLELSKVSTYDDVTERVARHLGMDDPTKIRFTPHDCY
YQKPKIQAIKYQGMGHLSEMLIHYQRKSDILYYEVLDIPLPELQDLKTLKIAFHYSTRND
TVVHSIRLPKQSTVGDLINDLKTKVALSHPDAELRLLEVFSHKIFKIFTLSDKIVNINNQ
CSTLRAEEIPEEEKNLGPQDRLIHVYHFAKDGYLARNFGEPFFLAIHEGETLDVVKLRIQ
KKLQVPDEEFAKWKVAFFSSLHRPEYLQDSDIVFSCFQRSVYGAWGQYLGLEHSGSSPKR
AYAASNNLQIG
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgactcagatgactgatcctctgccggcgttagatcaagaggatactgtgatgttggtt
caagattcagaagaggttgttgatgatcctcaacctatggaagtcacaccagcagaagaa
gccgttagggcacaggcagttgaggatcctgcttcttcttctacgagatttacctggagg
atcgagaatttttcgacgctgaacactgaaaaacattactctgatgttttcactgttggt
acttataattggcgtgtggtgatgtacctcaagggaaaaaacgtggatcacttatcgctg
taccttgaagttgcggactcggataatttgccttatgggtggagtaggcatgcaaagttc
agcttagcagtcgtcaatcaaatccataacaagatctcaatgagaaaacatcacccagaa
caccaatttacagcacgagaaaatcatatgggttttccatcgatcatgactcttaaatta
ctccactaccctactgcagggtatctcgtagacgatacttgtataattgaagcagaggtt
gctgtcaatgattctggaaatgaaacgggttatgttggtcttgagaatcagggagcaaca
tgttatatgaactctctcctccagactctatatcatattccttatttcaggaaatcagtg
taccatatgccaacaaccgagaatgatttggaatcaggaagcagcatccctttggctcta
cagactttgttttataagcttcaatacggtaagaatagcgtctctactaaggagctcact
aaatctttcagatggaatacacatgagtctttcatgcaacatgatgtgcaggaacttaat
agggttttgtgtgaaaagcttgaagataaaatgaagggaactgctgtggagggtacaata
cagcacctgttcgaaggtcaccatatgaactacattgaatgtgttaatgtggattataaa
tctactagaaaggaatcattttatgaccttcaacttgatgtaaaaggctgtagggatgtt
tacgcttctttcgacaagtatgtggaagtggaacatcttcaaggtgataacaagtatcat
gctgatcaacaccatggtttacaggatgcaaagaagggtgtcctttttattgacttccca
cctgtcctccaacttcagctcaaacgatacgaatatgattttaagcgagacatgatggta
aaaataaatgatcgttatgaattccccctgcaacttaatcttgacagggaggatggaaaa
tacttatctccagatgctgatagaagagttcgcaatctttacacacttcatggtgttttg
gttcacagtggtgggggacatggtgggcactactatgcttttataagaccgacattctca
gagcaatggttcaaattcaatgatgagagggtaacaaaagaagatatcaagaggatatta
gaggaacaatacggtggggaggcaaaaatttcaaatgcatatatgctcgtgtatatacgt
gaaagtgatagagatgaaattatgtgtgaggtggatgagaaagacattgctgaacacctc
aggatgagattgaagaaagaacaagaagaaaaggagcataaggagaaggaagaagcagag
gctcacctgtacactataataaaggttgctcgaaacgaggacttctctgaacagattggg
agagagattttttttgaccttgttgatcacaaaaaagttagcagttttcgtatccggaaa
aaaatgccttttaccctattcaaggaggaggttgcgaaagagtttggtgtgcctgtgcaa
tttcagcggtattggctatgggcaaagcgtctaaatcatacttatcgtccataccgacca
ttaactcttcaagaggagacacaatccgttgaaaagttgagagaaatatcaaataaggca
gctggcaatgaggcatggaataacaaagaactaaagttattcctggaaatagagattggg
ccggaattaaatcccattcctcctccttgtcatagaaagaaagaagatattcttcttttt
ttcaagctatatgatgctgaaaaggaagagattcggtatgttgggagacttttggttaag
ggtagtggtaagcctttggaaattcttaaaaagctaaatgagatggctgggttctctcta
gacgaagaaatagaactttatgatgaaataaagtttgagcccactgttatgtgtgaccgc
gtagacaagaagctcaccttctgcgatagcaagcttgaagatggggacattatctgcttc
caaaaacccgcttcagctgatagtatgacaccatacctctatcctgatgttccttctttt
ctagaatatgttcataaccgccaggttgtgcatttccgatctttggagaagccaaaggaa
gatgatttttgtttagagctgtcaaaggtatcaacatatgatgatgtcacggaaagagta
gcgcgccatcttggtatggatgatccaaccaagatcagatttacccctcatgactgttac
tatcagaaacctaaaatccaagctattaagtaccaaggtatgggccacttgtctgaaatg
ttgatccactaccaacggaaatctgacatcttgtattacgaagtcttggacattccttta
cccgagttgcaagatttgaaaactctaaagattgcattccattattcaacaagaaatgac
acggtcgttcatagtattagacttccaaaacaaagtacagttggagatctgatcaatgat
ctgaagacaaaggttgcgctgtctcatcctgatgcggagcttagattgctggaagtcttc
tcccacaagattttcaagatttttacgcttagtgacaagattgtgaacattaataatcaa
tgctcgactctaagggcagaggagattccagaagaggagaagaacttgggtcctcaggat
cgcttgattcatgtttatcactttgcaaaagatggatatttggcacggaattttggggaa
ccatttttcttggctatccatgaaggagagactttagatgtggtcaaattgcgaatacag
aagaaattacaggttcctgacgaggaatttgctaagtggaaggtagcatttttttcatcg
ctgcatcgacctgagtaccttcaggactcagatatagtgttcagctgctttcagagaagt
gtttatggagcttgggggcagtaccttgggttggagcattctggtagttccccaaaaaga
gcatatgcagccagtaacaatctacaaatagggtaa
DBGET
integrated database retrieval system
