Papaver somniferum (opium poppy): 113294218
Help
Entry
113294218 CDS
T05758
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113294218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113294218
03036 Chromosome and associated proteins [BR:
psom03036
]
113294218
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113294218
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113294218
PBAF complex
113294218
GBAF(ncBAF) complex
113294218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
113294218
NCBI-ProteinID:
XP_026398410
LinkDB
All DBs
Position
1:90313998..90319056
Genome browser
AA seq
1023 aa
AA seq
DB search
MEGGKGKGETNTCTTTTTTTTTTTTTTTSNSKQPQQVVGAPQNQQQQPGPRRRNGALKRK
AANNSSSAGPSKRLTRERNNLIPHHILYNNGPITRARQSPNKFGASESSAAVSAGGGGGG
SGVTSSSTVSTPQNLNDPLPNPVSSVGGEIINTIEESNKTKYEELERDLEPVIDAEFEAV
RSHGDVAHVIPTHAGWFSWEKVHPLEEHALQSFFNGESEKRTPDSYMEIRNLIVKKFHED
PKASFDPKDLSELSAGELDDRQEVMAFLDHWGLINFKPFPLADASMALPDGDGATKTSSL
VEKLYHFEAVESRPWGSFKPDLAAPVLPPRLYPESFIAEEVRPEGPAVEYHCNSCSGDCS
RKRYHCQKQADFDLCSECYNNGKFDAGMSHADFILMESAEPGVNGGSWTDQETLLLLEAL
ELFGPNWSEIAEHVATKTKTQCILHFVQMPIEDSFFEVKPAKDDVEANLEANIVTGSSAN
DLSGLKDAPDTKESKVEPDIDSNSVKIIPDTTEGKSATGSDSPAKKEALAETTKDQSVTH
EEQPLSPSMNISKPKDTIEVNLAVETSANIALNALKEAFQTVGSLPEPGEKFSFTEAGNP
VMALAAYLAGLVEFDYAAASARSSLKIISDQSPAIQLAARHCFVLEDSTDTGNIPSVIES
FDVEMSDKVVQNEEQNIQENSTSVLDGSSTTTTSPKKKLEEAIQNEKESLFSSGDEGKST
LSSAKKLDDETIPQDDTPVVEEPSDSALPREDTPSIVKESSDSTLPHEEPASTATESVDV
PLQAQATPSSVKESSGAVEEASECPEAPEAVDKLSNTASLEAKEFKQAAACNLTVENGEN
TGNDDKKVIGIKEEKDIGLNKNKDDHNIQRIKRAAITALSAAAVKAKLLAKQEEDEIQQL
ATFLIDKQLQKLELKLSFFTEMESVITRVREQMDRSRQKLYQERAQIIASRLGYPASASR
TVIPSFPTNRVAMSYANALPRQQPGTNFQRPQMMTSMVRPSGPHLSTPSIPSRTVAGASP
NNT
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggaaaaggtaaaggagaaaccaacacttgcaccaccaccaccaccaccacc
accaccaccaccaccaccacaacctcaaattctaaacaaccacaacaagtggtgggagca
ccacagaatcaacaacaacaacccggtcctagaagaagaaatggtgccctaaaacgaaaa
gcagcaaataattcatcttcagctggaccatcaaaacgtttaaccagagaaagaaacaac
ctaattcctcatcatattctttataataatggtcctataactcgagctcgtcaatctcca
aataaatttggtgcttctgaatcttctgctgctgtttctgctggtggtggtggtggcggt
tctggtgtcacttcgtcttccacagtgtctactccacaaaatctcaacgaccctttacct
aatcccgtgtcatctgttggtggagaaattatcaacaccattgaagaatctaataagact
aaatacgaggaattagaaagagatttagagcctgttattgatgcggagtttgaagctgtt
agatctcatggtgatgttgctcatgttattcctactcatgctggttggttttcatgggag
aaagtacacccacttgaggaacatgcattgcagtctttcttcaacggggaatcggagaaa
cggactcctgattcttacatggaaattaggaatttaattgttaagaaatttcatgaggat
ccaaaggcttcattcgacccaaaagatttgtcggagctctctgctggggagttggatgac
agacaggaggtgatggcatttttggatcactggggtttgataaattttaagccatttcca
ctcgctgatgctagtatggctcttcctgatggcgatggagctaccaagacatcttcactg
gttgaaaaattgtatcattttgaagcggttgaatctcgtccatggggaagttttaagcca
gatttagctgcacctgtcttgcctccgaggttgtatccagaatctttcattgctgaggag
gtgaggccagagggacctgctgttgagtaccattgtaactcatgctcaggagattgttcc
cgcaagcgttaccattgccagaagcaggcagatttcgatctatgttctgagtgttataat
aatgggaagtttgatgctggaatgtcgcatgctgatttcattctcatggaatctgcagaa
ccgggtgtaaatggtgggagttggacagatcaggagactcttctccttctcgaagcctta
gaattatttggaccaaactggagtgagattgcagagcatgttgccacaaaaactaaaacc
caatgtatcttgcattttgttcaaatgccaattgaggattccttttttgaagttaagcca
gctaaggatgatgttgaggctaatctcgaggcgaatatagttacgggttcaagtgctaat
gatttatctggtttgaaagatgctcctgacacaaaggagagcaaagttgagccagatatt
gattcaaattctgtgaagattattcctgacacaactgagggcaaaagtgctaccggttct
gattcacctgctaaaaaagaagctcttgctgaaacaaccaaagaccagagtgtgactcat
gaagagcaacctttgtctccctcaatgaacatttcaaaaccgaaggataccattgaagta
aatctcgctgtggaaacaagtgctaacattgcactgaatgctctgaaggaagcattccag
actgttggttctcttccagaacctggagagaagttttcatttacggaagcagggaatcct
gtcatggcattggcagcgtatcttgctggtttggtggaatttgattatgcagctgcatca
gctcgcagttcactaaaaattatatctgaccaatctccagccattcagttagccgcaagg
cactgttttgtccttgaagattcaacagataccggaaacatcccttctgtcattgaaagc
tttgatgtggaaatgtccgataaggtggttcagaatgaggagcaaaacatccaggaaaac
agtacatctgttttggatggaagttccacaactacaacttcccctaaaaagaagttagag
gaagcaattcaaaatgaaaaagagtctttgttttcttcaggtgatgaaggcaaatctact
ctgagtagtgcaaaaaaattagatgatgaaactattcctcaagatgacacaccagtggtt
gaggagcctagtgattcagctttgcctcgtgaggatacaccaagcattgtaaaggagtct
agtgattctactttgccgcatgaggaaccggcaagtactgcgacagagtcggttgatgtg
ccattacaagctcaggctacaccaagctcagtaaaggaatctagtggtgcagtggaagag
gcctctgagtgtcctgaggcaccagaggctgtcgataagttgtctaatacagcttccttg
gaagcaaaagagtttaaacaagcagctgcatgtaatttaacagtcgagaatggtgaaaat
acagggaacgacgataaaaaagtgattggtatcaaggaagagaaggatattggcttgaac
aaaaacaaagatgaccataatatccaaagaataaagcgtgctgcaattactgccctgtca
gctgccgctgtaaaggcaaagcttcttgcaaagcaggaagaagatgaaatccaacaacta
gctacatttttaattgataaacagttacagaagttggagctaaagttatctttctttacg
gagatggaaagtgtgatcacaagggttagggaacaaatggacagatcgagacaaaaactt
taccaagaaagggcccagataattgcttcacggcttggctatcctgcttctgcgtccaga
acagtgataccatcattccctactaacagagttgcaatgagttacgcaaacgcattgcca
agacagcaacccggtacaaactttcaaaggccacaaatgatgacaagtatggtgagacca
tcaggtcctcacctttctaccccatccattcctagcaggactgttgcaggtgcttcacct
aataatacgtaa
DBGET
integrated database retrieval system
