Papaver somniferum (opium poppy): 113294999
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Entry
113294999 CDS
T05758
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113294999
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113294999
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113294999
03036 Chromosome and associated proteins [BR:
psom03036
]
113294999
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113294999
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113294999
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113294999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
113294999
NCBI-ProteinID:
XP_026399145
LinkDB
All DBs
Position
7:6726614..6734266
Genome browser
AA seq
516 aa
AA seq
DB search
MNGDRNDEVPNPVGPTQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRG
GRVVLFERTDSRDNNGNRRDLERMDYQIRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNIDPSKTMGNGSTAGPSIPTSPK
PFLANGGSPEKSSYSNLSNDLAFPPGGIPSLRLPVVVPSQETSLVARCRRIYAHAHDYHI
NSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
TLAYSSSKGSIRLIDLRQSALCDTHSKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRHI
LSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGSRVATG
SYSNLFRVFGCGNGSSEATTLEASKNPMRRHVQTPARPSRSLGSLTRVVRRGGDSPGSDA
NGNSFDFSTKLLHLAWHPTENSLACAAANSLYMYYA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagatagaaatgatgaagtgccaaatccagttggtccaacacaaccacttgac
tggaaattctctcaagtttttggggaacgaacggctggtgaagaagtacaagaagtcgat
attatttcagcaattgagtttgataaaactggggatcaccttgccactggtgatagaggg
gggagggtcgtcctattcgaaaggaccgactccagagataacaatggaaatcgaagagat
ttagaaaggatggattaccaaatcagacatcctgaatttcgttacaagacagagtttcaa
agtcacgagcctgagtttgactatctgaagagtttggaaattgaggagaaaatcaacaag
ataaaatggtgccagacagcgaatggtgcattgtttcttctctcaaccaatgacaaaaca
ataaagtactggaaggttcaggaaaagaaggttaaaaaaattagtgagatgaatatagac
ccctcaaaaactatgggaaatggcagcactgctggtccaagtatacccactagcccaaag
ccatttcttgcaaatggaggatctccagaaaagtcatcatacagtaatttgagtaacgac
ctcgctttccccccaggaggaattccctcgctacgtttgcccgtggtagttcctagccaa
gagacaagtcttgtggctagatgccggagaatatatgctcatgcgcatgactatcacatt
aactcgatttcgaataacagtgatggcgagacttttatatctgccgacgatctgcgtata
aatctttggaatctggaaataagcaaccaaagtttcaacattgttgatgtgaagcccgca
aatatggaggatctaactgaggttataacatcagctgagttccaccctactcattgtaat
acgttagcgtatagtagctcgaagggctctatccggcttattgatctgcgacagtctgct
ctatgtgatactcatagcaaattgtttgaggaacaggaggcacctggttcgagatcattt
ttcaccgagattattgcatcaatttcagatatcaagtttggaaaggatggaaggcatata
cttagtcgtgattatatgactcttaagctatgggacataaatatggattctggtccagtt
gcaactttccaggttcatgaatatttaaggcccaagctctgtgatttatatgaaaatgat
tcaattttcgacaaattcgaatgttgtttgagtggagatggatcgcgtgttgcaacaggt
tcctatagcaatctgtttcgtgtatttggttgtggtaacggtagcagtgaggcaacaacc
cttgaagccagcaagaaccccatgaggagacatgtccaaactcctgcaagaccttcaaga
tctctgggtagtcttacccgtgttgttcgacgaggaggagatagtccaggttcggatgca
aatggaaattcatttgatttctcaacaaaattgcttcacctagcttggcacccaacagaa
aactcacttgcttgtgctgctgcgaatagtctgtacatgtattatgcataa
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