Papaver somniferum (opium poppy): 113295003
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Entry
113295003 CDS
T05758
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial-like
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113295003
03400 DNA repair and recombination proteins [BR:
psom03400
]
113295003
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
113295003
DNA replication proteins [BR:
psom03032
]
Prokaryotic type
DNA Topoisomerases
113295003
DNA repair and recombination proteins [BR:
psom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
113295003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HMMR_C
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
113295003
NCBI-ProteinID:
XP_026399153
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Position
1:complement(97538752..97551766)
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AA seq
943 aa
AA seq
DB search
MKSSLSNSSQFSTKTTTTMAFSTGLRFTASSIIRYRPSLPITTLNTFRVSKYRPGLSELR
FLSAAPRRTIKPRAKRSEETGREDEEGGGGGESGNGSLAVKERPEGKIVPMELHKEAHDS
YMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPHRKCARVVGEVLGKFHPH
GDTAVYDALVRMAQDFSMRCPLIRGHGNFGSVDADPPAAMRYTECRLEALTEAMLLSDLE
QNTVDFEPNFDNSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIH
NPEATLQELLEYMPGPDFPTGGIIMGTTGILEAYRTGRGRVTVRGKTDIEVVDSKTKRSA
IIIKEIPYQTNKSTLVEKIAELVETKILEGISDIRDESDRTGMRIVIELKRGSDPALVLN
NLYRFTALQSSFSCNMVGILDEQPKLMGLKELLQAFLDFRCSVIERRAKFKLSQAQDRKH
IVEGIIVGLENVGAVIRVIRESPSNAMASAALRKAYNLSEKQADALLDMTLRRLTLNESK
KYIDEAKHLTEEISKLRELLSSKKQIFQLIEQEANEIKNRFATPRRSTLEDADSTLDEMD
IIPNEEMLLSLSEKGYLKRMKPDTFNLQKRGTIGKSVGKMRVNDSMSDFLVCHTHDHVLY
FSDKGIVYSARAYRVPECTRTAAGTPLIQILSLSDGERITSIIPVSEFAEDQYLVMLTAN
GYIKKVSLNLFSSIRSTGIIAIQLVPGDELKWVKLCTDDDLVAVASLNGMVILSPCDTLR
TLGRSTRGSVAMRLKSGDKMACMDIIPAAIRKELDNQTRVKDPSPPWLLFISECGMGKRV
SVNSFRLSPLNRVGLKGYKLQEEDRLVSVYVVGLSPAEDGRTDEQVVLVSQSGTINRFKV
QDISIQSRYARGVILMRLEHAGKIQSASLISAVEKEVDAEPAI
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctcactctcaaactcctcccaattctctacaaagacaacaacaaccatggcg
ttctcaacaggacttcgttttacagcttcttctatcattcgctaccgtccttcactccct
atcactactctaaacacatttagggtttctaagtatcgtcctggtttatctgagctccgt
ttcctgtctgctgctcctcgcagaactataaaacctagggctaagagaagtgaagaaaca
ggaagagaagacgaggaaggaggaggaggaggagaaagtggaaatgggagtttggctgtc
aaggagagacctgagggaaagattgttccgatggagcttcataaagaggcacatgactcg
tatatggcttatgctatgtctgtattgcttggtagagcattaccagatgttcgtgatgga
ttaaagccagttcatagaagaattttatttgctatgcatgaactgggtctttcatcacga
aagccacataggaagtgcgccagagttgttggagaggttctaggtaaatttcacccacat
ggagacactgctgtttatgatgctttggtgcgaatggcccaggatttttctatgcgatgt
cctctcattcgagggcatggtaattttggttcagttgatgcagatcctcctgctgcaatg
cgttacaccgagtgtagactggaagcacttacagaagcaatgctcttgtctgatcttgaa
cagaatacggttgattttgagccaaattttgataattcacaaaaagaaccatcagtttta
ccagcaaggctcccaactcttctattgaatggttcttctggaattgcggttggaatggca
accaacattcctccgcataatcttggagagttggtagatgcactttctgttctgattcac
aatccagaagctacgctccaagaattgttggaatacatgccagggcctgactttccaact
ggaggtataatcatgggtacaactggtatactagaagcataccgaactggacgtggacgt
gtgacagttagaggaaagactgacattgaagtagttgattccaaaacaaagcgctctgca
attattatcaaggagatcccttatcagaccaacaaatctactctagtggagaaaattgct
gaacttgtggaaactaagattcttgaaggcataagtgatattcgtgatgaaagtgatcgt
actggaatgcgtatagtcatagagcttaaaagaggatcagatccagctctcgttctcaat
aatctgtatcgctttactgcgcttcagtctagctttagttgtaacatggttggcatcctg
gacgaacagccaaaactaatggggttaaaagaattgcttcaggcatttctggatttcaga
tgctcagttattgaaaggcgtgcaaagtttaagctttctcaagcccaagataggaaacat
attgtagagggcatcattgttgggcttgaaaatgttggcgcagttattcgtgtaattagg
gaaagtccaagtaatgcaatggcttcagctgctctgaggaaagcatataacttatctgaa
aaacaagccgatgctttattggacatgaccctgagaaggctcactttaaatgagtcaaag
aagtacattgatgaagctaagcatttaacagaagaaatatctaagttacgtgaactcttg
tcaagcaaaaaacaaatatttcagttgatagaacaagaagcaaatgaaatcaagaacaga
tttgcaactccaaggcgttcaacgctggaagatgcagacagtacacttgatgaaatggat
ataatcccaaacgaagaaatgcttctgtctctcagtgagaaaggttaccttaagaggatg
aagcccgacacctttaatcttcaaaagcgtggtaccattggaaagtctgttgggaagatg
agagtaaatgattctatgtccgacttccttgtttgtcatacacatgatcatgtgctctac
ttcagtgacaagggaatcgtatattctgcccgcgcatatagagttcctgaatgtaccaga
actgcagctggcactcctttaatccagatcttgtccttatctgatggtgagaggataaca
tccataattcctgtcagtgagtttgctgaagatcagtatttagtaatgctcacggcaaat
gggtacattaagaaagtgtcgttgaaccttttctcttcaatcagatcaacaggaatcata
gcaattcaactggttcctggtgatgaactaaaatgggtcaaactctgcacagatgatgac
cttgtcgcagttgcctctttaaatgggatggttattctgagtccctgcgatacccttcga
acacttggaagaagcaccaggggttcagttgccatgagactaaagagtggggacaagatg
gcatgcatggacataataccagcagccataaggaaagaattggacaaccaaactcgggtt
aaggatcctagtcccccatggttgctatttatatctgaatgtggtatgggaaagcgggtc
tctgtgaacagcttccgcctatcacctctaaatagagttggtctgaagggttacaagctt
caagaggaggatcgccttgtatctgtatacgtggttggtttgtctccagcagaggacgga
aggaccgatgaacaagtagtgctagtcagtcaaagtggaacaattaacagattcaaggtt
caggatatatcaatacagtccagatatgcaaggggtgttattctgatgagacttgagcat
gctggaaagatccagtcagcttctttgatatcggcagtagaaaaggaagtggacgccgag
ccagcaatctga
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