Papaver somniferum (opium poppy): 113295383
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Entry
113295383 CDS
T05758
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
113295383
Enzymes [BR:
psom01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
113295383
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
LVIVD
Motif
Other DBs
NCBI-GeneID:
113295383
NCBI-ProteinID:
XP_026399503
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Position
7:complement(9915030..9920911)
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AA seq
733 aa
AA seq
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MMSSMKTSCTCTLHYLLLLILINNYARDTSALSNLEDGVQLYVQDNHVVMDNGLVQVNIS
NPSGLVTEVQYNGIDDLLEILNEEQNRGYWALYWTQRGNEGSQFLIEGTSFKVIVQNETQ
VEISFTRTWNSSASSSSNPSNSNSTDGLPLNFDIRYVMLKGSSGFYTYGIYEHLSGWPDF
NLNRTRVAFKLRKDKFQYMAISKTRQRRMPLPEDREPPRGEVLQFKEATLLVDPVEPELK
GQVDDKYMYAKNNEDIKVHGWVSSDPPVGFWHITASDEYRGGGPLKQDLTSHVGPISLTV
FFSSHYMGQDKIPMFGNGEPWKKVYGPVFLYLNSAPPGTNESALWDDANEQLQQEAHKWP
YSFIASTDYPKSDQRGTVNGRILVRDRFVSKEDIPAVDAYVGLALPGEVGSWKTEYKGYQ
FWTRSGPHGSFTIKNVHSGDYNLYAWVPGFIGDYKYDNLITVQAGMYIYITIPLLLITSV
LRLFTDIHPFVIKTGDSIELDDDLVYEPPRNGTTLWEIGIPDRTAAEFFIPDVDPKYVNP
LYLTQDSFRQYGLWEQYSVLYPKTDLVYTVNSSTYQKDWFYAQVTRKLGDDKYNSTTWQI
NFNLDSVDQGTIYKLRVAIASTTGAELQIRLNDLNTEIPHFTTGGMYKDNAIARYGIHGL
YLLFNVDVKSDWLKDGENTIFLSQVRGEGPFKGIMYDYIRLEAPADDERTNAEARLYRDP
TNHPSVNLINSPM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatcaatgaaaacttcttgtacatgcacgttacattacttgttattgttgatt
ctaatcaacaattacgcacgggacacatccgctttgagcaatctggaagatggtgtacaa
ttgtatgtgcaagataaccatgtggtgatggataatgggttagttcaagtgaatatatcc
aatccttctggattagtcactgaagttcagtacaatggtatcgatgacttgctagaaata
ctcaatgaagaacagaatagagggtactgggctctgtattggacccaaaggggaaacgaa
ggatcacaatttctgattgaaggaactagttttaaggtaatagttcaaaatgaaactcaa
gttgaaatttcattcacaagaacatggaattcctcggcttcatcgtcctcaaatccatca
aactcaaacagtacagatggtcttcccctcaactttgatataagatatgtaatgttaaaa
ggttcgtcaggattctatacatatggcatctatgagcacctaagtggatggccagatttc
aatctcaacagaactagggtcgccttcaagcttcggaaagacaagtttcaatatatggct
ataagtaagacacggcaaagacgaatgccactgccagaggatcgtgaaccaccaagaggc
gaagtactacaattcaaagaagcaactctccttgtagaccctgttgagccagaactaaaa
ggccaggtggatgacaagtacatgtatgcaaaaaataatgaagacataaaggttcacggg
tgggttagctctgaccctccagtaggtttctggcatatcacagcgagcgatgaatatcga
ggtggtggtcctctaaagcaggacctcacctcacatgttggtcctatatctctcacagtg
tttttcagttcccactatatgggccaggataagatacccatgtttggaaatggagaacct
tggaaaaaagtgtatggtccggtattcctatatcttaattcagctccacccggtacaaat
gaaagcgcattgtgggacgacgccaatgaacagctgcaacaagaagcccataaatggccg
tatagtttcatagcttccaccgactatcctaaatctgatcaaagaggcacagtcaatgga
agaatacttgtccgtgacaggtttgtaagcaaggaagatatacctgcagtagatgcttac
gttgggttagctttaccaggagaagttgggtcctggaagacggagtacaaggggtaccaa
ttttggactagatctggccctcatggttcattcacaattaagaatgtacattctggagat
tacaatctctatgcttgggttcctggtttcattggagattacaagtatgacaatctcatt
acagttcaagcaggtatgtatatatatataacaattcctcttcttttaattacttcagtt
ttgcgcttgtttactgatattcatccattcgttattaaaacaggagattccattgaattg
gatgatgaccttgtttatgagcctccaagaaatggaactacgttgtgggagataggtatt
ccagacagaaccgcagccgagtttttcatcccagatgttgaccctaaatacgttaatcca
ctatacttgacgcaagacagttttagacaatatggattgtgggagcaatacagtgtttta
tatccgaaaacagaccttgtttacacagtaaacagcagcacttaccagaaagattggttc
tacgcgcaggttactcggaagttgggagacgataagtacaactcaacaacatggcagata
aatttcaacctagatagtgttgatcagggcacgatttataagttgcgagtggcaattgca
tccacaactggagcagaattgcaaattcgactaaacgatttgaatacagaaattcctcat
ttcacaactggaggaatgtacaaggataatgccattgcgagatatggtattcatggactg
tatctgttgtttaatgttgatgtaaagagtgattggctcaaagatggcgaaaacaccatt
tttctttcacaagttagaggtgaaggtccgtttaaaggtataatgtatgactatatacgt
ctcgaagcaccagcagacgatgaaagaacgaatgcggaagcaaggctatatagggatccc
actaatcatccaagtgttaacctaattaattctcccatgtag
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