Papaver somniferum (opium poppy): 113295384
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Entry
113295384 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113295384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113295384
03009 Ribosome biogenesis [BR:
psom03009
]
113295384
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113295384
Spliceosome [BR:
psom03041
]
Complex A
U1 snRNP components
U1 related factors
113295384
Complex B
113295384
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113295384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113295384
NCBI-ProteinID:
XP_026399506
LinkDB
All DBs
Position
7:complement(9953866..9959533)
Genome browser
AA seq
511 aa
AA seq
DB search
MSRYDSRSSDPSSYRDRKSDSGLGGGSGGGGGGYEGGSRYSSSSKREKVEVSSPKKFDLD
GLTHFEKNFYVESPSVASMTEDEVEEYRIKRQITVEGKDVPKPVKEFTDIGFPEYVMQEV
LKAGFVEPTAIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPI
VLVLAPTRELAVQIQQEVSKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLI
DMLESHHTNLRRVTYLVLDEADRMLDMGFEPQMKKIVAQIRPDRQTLYWSATWPKEVELL
AKQFLYNSYKVVIGSVDLKANHAIRQIVEIVPESQKYNKLVKLLEDIMDGSRILIFMDTK
KGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLAEFRSGKSPIMTATDVAARGLDVKDVK
YVVNYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPDL
ASLGRGAPPPPSGLGGFRDRGRGFGGGRTWS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttacgatagtaggtcaagtgacccatcttcataccgagaccgtaaaagtgat
tcggggcttggtggtggtagtggtggtggtggtggtggatatgaagggggaagtcgttat
tcatcatcaagtaaaagagagaaagtagaagtgagctcaccaaagaagtttgatttagat
ggattaacacatttcgagaagaatttttatgttgaatcaccttcggttgcatcgatgact
gaggatgaagttgaagagtataggattaagagacagattacagttgaaggaaaagatgtt
cctaagcctgtcaaggagttcaccgatattgggttccctgaatatgtcatgcaggaagtg
ctgaaggctggttttgttgaacctaccgcaattcaatctcaaggatggcctatggcttta
aagggtcgtgatctcattggtatagcggaaacagggtcaggaaagacacttgcctatcta
ctgccggcgatagtccatgttaatgcacagccatttttagctcctggtgatggtccaatc
gttttggtattggccccaacccgtgaacttgctgtccagatacaacaagaagtttcaaag
tttggggcatcctcaaagatcaagagcacatgtatatatggaggggttccaaagggacct
caagttcgagatcttcaaaaaggtgttgaaattgttatcgccactcccggaaggcttatt
gatatgttagaatctcatcatacgaacttgagaagggtgacataccttgtgttggatgag
gcagatcgaatgctagacatgggttttgaaccccagatgaagaaaattgttgctcagatt
cgaccagaccgtcaaactttgtactggagtgctacttggccaaaggaggttgaactactt
gcaaagcaattcctctacaactcctacaaggtggtcattggttccgttgacttaaaagca
aaccatgctatccgccagatcgtggagattgtgccagagagtcagaaatataacaaactg
gtaaaattgttggaggacattatggatggtagtaggattttgatattcatggacaccaag
aaagggtgtgaccaaactacaaggcagcttcggatggatggttggcctgctctctcaatc
catggagataagagtcaagcagagagagattgggttctcgcagagttcaggtctggaaaa
agtccaatcatgacagcaacagatgttgccgcacgtggcttagacgtgaaggatgtcaaa
tatgtcgtcaactatgactttcctggttcactggaggattatgtccaccgaattggtcga
acaggaagggctggtgccaaaggaactgcgtacacattcttcactgcagcgaatgcgaga
tttgcgaaggaacttattggcatccttgaggaagctggacagaaggtcagtcctgatttg
gcatcactggggcgtggggcacctcctccaccatcaggtcttggtggcttccgtgatcgt
ggaaggggttttggtggaggacgtacatggagttaa
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