Papaver somniferum (opium poppy): 113295464
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Entry
113295464 CDS
T05758
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113295464
09124 Replication and repair
03420 Nucleotide excision repair
113295464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113295464
03400 DNA repair and recombination proteins [BR:
psom03400
]
113295464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113295464
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
113295464
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113295464
TCR (transcription coupled repair) factors
Cul4-CSA complex
113295464
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113295464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
113295464
NCBI-ProteinID:
XP_026399588
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All DBs
Position
1:complement(102182410..102191544)
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AA seq
817 aa
AA seq
DB search
MSHQKRPYSNNSDSISAAMKKAKSQAINYSSTAEKNGIRFNDDDNDDEGSNPMILEDNII
KNHDILGGAGSSSGGGGGCSRAIAANLSRKKATPPQPAKKLVIKLVKEKPKLPTNFEENT
WGTLKSAISAIFLKQPDPCDSEKLYQAVCNLCEHKMGGNLYKKIEKECEAHISTALQNLV
DQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFCKHL
SLLPEVGHKTVTGLLRLIERERLGEAIDRTLVNHLLKMFNALGIYSESFEKPFLVGTSEF
YASEGAKYMQQSDVPDYLKHVELRLHEEHERCLLYLDAGTRKPLIATTERQLLEHHISAI
LDKGFTMLMDRNRVEDLRRMYALFSRVNAFESLRQALSSHIRVSGQNFVMDEEKDKDLVS
SLLSFKASLDMIWEESFSKNEAFSNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKG
ASEEELEGILDKILVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTEC
GSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIELSVHVLTTGYWPTYPPMDVR
LPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKANFPKGKKELSVSLFQTVVLMLF
NDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKGRDVEDGDSFVFHEEFSA
PLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQ
LKFPIKPVDLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccaaaagcgcccttactctaacaacagtgattcaatctcagcagccatgaaa
aaagctaaatctcaagctataaattattcgtcaacagcagaaaagaatggaatacgtttc
aatgatgatgataacgatgatgaaggttctaatccaatgattctcgaagataatattatt
aagaatcatgatattcttggcggtgctggtagtagtagtggtggtggtggtggatgtagt
cgtgctatagctgcaaatttgtctagaaagaaagcaactcctcctcaacctgctaagaaa
cttgttattaagcttgttaaagaaaaaccaaagctgccaacaaattttgaagaaaataca
tggggaacactgaagtcggctattagtgctatattcctaaagcaaccagacccctgtgac
tcagaaaagctttatcaggctgtttgcaatctgtgtgagcacaagatgggcggaaatctc
tataaaaaaatcgagaaggaatgtgaagcacacatttccacggcactgcaaaatttggtt
gaccagagtcctgatttggtggtattcctgtctcttgtggagaaatgttggcaagatctt
tgcgaccaaatgttaatgattcgtggcatagccttgtatctggacagaacatatgtcaaa
caaacaccaaatgtgcgttcattgtgggacatggggctgcagctattttgcaaacattta
tctttgttaccagaagttgggcataaaacagtcacgggtcttttaagattgatcgaaagg
gaaagattaggtgaagctattgacagaactcttgttaatcatctcttgaagatgtttaat
gcactaggaatctactcagagagctttgagaaaccatttcttgtggggacatctgaattt
tatgcttcagaaggtgcaaaatacatgcagcagtcggacgttccagattatcttaagcat
gtggagttaaggttgcatgaagagcatgaaagatgcttactatacctggatgctggtaca
aggaagccactaatagcaactacagaaagacaacttctcgagcatcatatatctgcaatt
ctcgataagggtttcacaatgcttatggatcggaatcgcgttgaggatcttcgaaggatg
tatgcgctattttcacgggttaatgcatttgaatccctaagacaggccttgagttcacac
atccgtgtttctgggcaaaactttgtcatggatgaggagaaagacaaagatttggtctcc
tctcttctaagttttaaagcgtctctcgatatgatatgggaagaaagtttctctaagaac
gaagcattttctaacacaattaaagatgcgtttgaacatctcattaatcttcgtcagaac
cgtcccgctgagttgattgcaaagtttctggatgagaagcttcgtgctggtaataagggt
gcttctgaagaggagttagaaggaatacttgataaaattctggttctattcagatttata
caaggcaaggatgtgtttgaagcattctacaaaaaggatcttgctaagaggctattgtta
ggaaagagtgcctccatcgatgccgagaagtccatgatttcaaagctgaagaccgaatgt
gggagtcagttcacgaataaacttgaaggaatgtttaaggatattgaattatcaaaggag
ataaatgagtccttcaaacaatcgtcccaagctaggacaaaactaccatcgggtattgag
ttgagcgtccacgtattaacaactgggtactggccaacatatccaccaatggatgtccga
cttcctcacgaactgaatgtctatcaggatattttcaaagagttctatctgagcaagtat
agcggaaggcgcttgatgtggcagaactcactaggtcattgtgtactcaaggcaaatttt
ccgaagggtaaaaaggagctgtcagtttctctgtttcagactgttgttttgatgctgttt
aacgatgcccaaaaacttagtttccaagatattaaggattcaacgggtatcgaggataag
gagctgagaagaactctgcagtcacttgcttgtggaaaagttcgcgtactccagaagttt
cctaaagggagggatgtggaagatggtgattcttttgttttccatgaagagttttccgca
cctctataccgcatcaaggtaaatgcaattcagatgaaggagacagtagaagagaacaca
agcactactgaaagagtatttcaggatcgtcaatatcaggtcgatgcagctattgttcgt
ataatgaagacaaggaaagtgctaagccacacactcctgataactgagctcttccagcag
ctgaaattcccaataaagccagttgatttgaaaaaaaggattgaaagtctcattgacagg
gagtacctagagagagacaagaataatccccagatatacaactaccttgcatga
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