Papaver somniferum (opium poppy): 113295901
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Entry
113295901 CDS
T05758
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113295901
Transcription machinery [BR:
psom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
113295901
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
tRNA-synt_1c_C2
KdgT
Motif
Other DBs
NCBI-GeneID:
113295901
NCBI-ProteinID:
XP_026400019
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All DBs
Position
7:14249486..14252924
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AA seq
562 aa
AA seq
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MNFRLDLKWVSPIQSSIFTNSSTNRQQFPPSVRGKEVSCESARVSLISVSPDESDSTLIK
DSFRVSACSSAAVQILESSSAIEREEMKLKTKKGPGIIMYDPFHSIATPTQDERSILNSS
SHTNKTSYFGLLVNSLEKVEEIFVDEELIRLEKDIMVQLGRLGALKLFHACLSRNLKTTT
ATTPAAATLNMSLPLPVIPEDSPTNGGVNDEVGDVITVRSGRKEERISKRKRALENAAKL
SYLSPTMKRISKANFSSNKRSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRMASF
SSWAEAARIDEKMLKERLHFGWYCRDKLLKSTRSLVLFLARNYRGVGISLEDLLQAGYMG
VLLGAERYDHTRGYRFSTYVQYWIRKSMSAYVAQNSRGIQLPATLARAIYQIQKARKTLH
SLYGRYPDDNEIAAFTGLSLAKIRLASKCPRIVGSIDQKLGDDINIKFMEFTPDRSVEIP
DEVVMKQHMQKDVYKLLEDLDQREKQVLILRQGLWDGQCKSLEEIGKLFNVTKEWIRKIE
KSAYTKVRKEENLSNLSHYLDL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcagattagacttgaaatgggtttctccaattcagtcttctatattcaccaat
tcatcaacaaacagacaacaattcccaccttctgtaagaggcaaggaggtttcttgtgaa
tcagcaagggtgtccctaatatctgttagtcctgatgaaagtgacagtactcttattaag
gattcttttagggtctccgcgtgttcttcagcagctgtacaaatcttagaaagtagtagt
gcaatagaaagggaagaaatgaagttgaaaactaaaaaaggccccggcataatcatgtac
gatccgtttcacagcatcgcaacacctacacaagatgaaagatctatacttaattcaagt
tctcatacaaacaaaacatcgtattttggtttactagtgaatagtcttgagaaagttgaa
gaaatttttgtcgacgaggaactcataagattggagaaagatatcatggtccaattagga
aggcttggagctctaaaattgttccatgcctgtctatccaggaaccttaaaacaaccaca
gcaacaacgcccgcagcagcaaccttaaatatgtccctaccacttcccgtaattcctgaa
gattctccaacgaatggcggcgtaaatgatgaagtaggtgatgtaataactgttcgctcc
ggaagaaaagaggagagaatatcaaagaggaaaagagcattagaaaatgctgccaagctt
tcttatttatcaccaactatgaaaagaattagtaaggctaatttttcgtctaacaaaaga
agtaaaagagttatagttgctaaaaacgaatcagaaatgtcaaggggtgtgaaggaggtt
gtgaacttggaaagaatcagaacgatgctcgaagaagaaactgggaggatggcaagcttt
agcagctgggcagaagcagctaggattgatgagaaaatgttgaaggagcgtttgcatttt
ggttggtattgcagagataaacttctgaagagcacgcgttcgttagttttgtttcttgca
agaaactaccgtggagttggaatatcattagaagatctactccaggcagggtatatgggc
gtccttctaggtgcggagaggtacgatcataccaggggatacagattttctacctatgtt
cagtactggatcagaaaatcaatgtcagcctatgttgcacaaaattctcgcgggattcaa
ctacctgcgactctagctagagctatatatcagatacagaaagccagaaaaacccttcac
agcctatatgggaggtatcctgatgataatgagatcgctgcatttacgggtctgtcattg
gcgaaaattcgattggctagcaaatgtccaagaattgtaggctctatcgaccagaaactt
ggggatgacataaatatcaaatttatggaatttacaccagacagatcagttgaaataccg
gacgaggtagtgatgaagcaacatatgcaaaaagatgtgtataaactactggaagacttg
gaccaaagagaaaaacaagtgttgattctaagacaagggctttgggatggtcaatgcaag
tcacttgaggagataggcaagctttttaatgttacaaaagagtggataagaaaaatagaa
aaatcagcttataccaaagtaagaaaagaggaaaatttatcaaatttaagccattatttg
gacttgtaa
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