Papaver somniferum (opium poppy): 113296327
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Entry
113296327 CDS
T05758
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113296327
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113296327
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113296327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
AAA_22
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
113296327
NCBI-ProteinID:
XP_026400420
LinkDB
All DBs
Position
7:251004335..251013342
Genome browser
AA seq
1371 aa
AA seq
DB search
MWPNHVVAGAGLIGFSAVSVLPHSRLGCFLLSVTPLSATLVSSSTVLLSFSPSLTRFSRQ
NPSSTIFITSLIFILSLLSCITNRQKKHFHRSLRSSVGDSDTFWYLASVLKNMSYPVDSY
ALKSVFDLPEPFRSTFKFRYFNSLQSECFAGCYFSDMNMVISAPTGSGKTVLFELCILKL
LSRFLSQDGRFLHMKGTLKTVYIAPSKALVQEKLRDWNQKFGLLGIKCLELTGDSESHSP
KNMQEADIILTTPEKFDSVTRYRIKDGGLSFFCDIGLVLIDEVHLLNDPRGASLEAIVSR
IKMLARSPEMESSALAHVRFIAVSATIPNIEDLGEWLMVPVQGLKRFGEEMRPVKLTTRV
FGYAPAKNDFLFERRLQNYVFDILMQHSRGKSALIFCSTRKGAQEAALCLSQTAITFGLS
NPFIKSREQQERLKEASLSFSDKQMQSCIFVGVGYHNGGLCQKDRNLIEALFLKGDLQVI
CTTNTLAHGINLPAHTVVVKSTQHFNKEKGLYMEYDRSMILQMCGRAGRPPFDDTGTVII
MTRKDTVHLYENLLTRCETVESQLLSFVTEHLAAEIVQLTVNDVPRAIEWIKCSYLYVRM
KKNPSNYALERVPGGGLEMHMQEICVQKVNELSGHGMIWTDEYGFLLKPLEPGRLMTKYY
LKFDTMKNIMGTPEKSSLEDALHVVCRSEEISWIQLRRNEKRILNDINTDKEGRLRFHIL
GENGKRKKRIQSREEKIFLLANDCLTGDPSCHDLSLSQDMNSICSNGSRIAKCMKKYFTY
KKNYKGAFNSTLLAKCLDQKLWDDSPFLLKQLTGIGTVTAKALNSAGINTFGTLADADPR
RIEIVTNRKYPFGNHIKESLLSLPPKVELSIEEIGCQRQGKSKLVVTLTRLSQPVPATKR
HFADMVVGSEEDNLILFHEKIRVDEFSSPYSTTVLVSRPEQGKLTVRADLLFEEYIGLDL
HKNVLLVKEIESNMIRKRGGYRTTSTYDLPQEIYIVDDDDKKTTSHTSTKELHVSHKSTE
VFSMPSFNLLEEESDEDVAVIKTEEKESEIITEQTVFDHIRRKAKNFPVFATSSSADSST
SGKLVSVKRSQSPNHVEPHSTSHVLEETNASMRRATINGPDMEPGDGFRKDETLKHHVNT
RHSETNSSIQTYPINGPDMQLDGGFRKDETPKHHVNTRHSSSFGLLEEHMNIGIASPEQT
VFDHIRKKAKNFPALTIEAMRLEPVVPSRKRFCLDQFKTSISVEEHEAEISKITSEDSTT
IPDSRMGDMGRLVYGTNTYVKQHTSTSSARSVSSHILPKVLGTQTDSAELRDISMFDRIK
HTSHSITSGDHYSGKQQQYSNGSDRQLCSLDMIDEKKKEPFFGFKSVFSFL
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccaaccacgtcgtagccggggcgggactaattggcttctcagcagtcagcgtt
ctaccacattcacgccttggctgctttcttctcagtgtcacgccactatcagccactcta
gtttcttcttctacggttcttctctctttctctcccagcctcactcgcttctcccgccaa
aatccctcttccaccattttcataacttcgcttatattcattctatcgcttctttcttgt
attacgaatcggcagaagaaacacttccatcgttcgttaaggtcaagcgtaggagattct
gatacattttggtacctggcctccgtgctcaaaaacatgagctaccctgtggattcatat
gctttgaagtcagtgtttgatttgcctgagccttttcgctcaactttcaaattcaggtat
ttcaattcgttgcagagtgagtgctttgctggttgttacttctctgacatgaacatggtc
atttcggcgccaactggaagcggtaaaacggtgttatttgagctatgcatcttaaagctc
ctttctaggttcctttctcaggacggaaggttccttcatatgaagggtacactgaaaaca
gtctacatagctccatctaaggccttagtacaggagaagcttcgtgattggaaccagaag
tttggtttattgggtattaaatgcttggagctcacaggtgatagtgaatctcacagccca
aagaatatgcaagaagcagatattattctcactactcctgagaagtttgattccgtcacc
cgctatcgcataaaagatggtggtctgagttttttctgcgacatagggcttgtacttatt
gacgaggttcacttattaaatgatcctcgtggagcttcattggaggcaattgttagtaga
atcaaaatgcttgctcgcagccccgaaatggaatcaagtgctctggctcatgttcggttc
attgctgtttcagctactattccaaacattgaggacctcggggaatggcttatggttcca
gttcaaggacttaaaagatttggagaagaaatgagacctgtaaagttgaccaccagagta
ttcggttacgctccagcaaaaaacgatttcttgtttgaacggcgccttcaaaactacgtt
ttcgatattcttatgcaacattctagagggaaatctgccttgattttctgttcaaccaga
aaaggagcacaagaagcagcactatgcctctctcagactgcaataacatttggcctctcg
aatccattcataaagtcgagggagcaacaggaacggctaaaggaagcttcgctatcattc
agtgataagcaaatgcaatcatgtatttttgttggtgttggttaccacaatggtggacta
tgccaaaaggaccgcaaccttatcgaagccctttttcttaaaggagatcttcaagttata
tgcactacaaacactcttgcccatggtatcaacttaccagcacacaccgttgtggttaag
tcgacacaacacttcaacaaagagaaaggcctctacatggagtatgatcggtcaatgata
cttcagatgtgtggtagggctgggcgtcctccatttgatgatactggcacggtgataatt
atgacaagaaaagatacagtccacttgtacgagaatttattgaccagatgtgaaacggtt
gagtctcaattactttcatttgtgacggagcatctagctgcagaaatagttcagctaact
gtcaatgatgtacctcgggcaattgagtggataaaatgttcttatttgtatgtgcgaatg
aaaaagaacccctcgaattatgcattagaaagggtccctggtggagggctagagatgcat
atgcaagaaatttgtgttcagaaagtaaacgagctatcaggacatggaatgatctggaca
gatgaatatggttttcttttgaagccgcttgagcctgggaggctgatgaccaaatattat
ttgaaattcgatacgatgaaaaacataatgggtacccctgagaaatccagtttggaagat
gctcttcatgttgtttgccgctctgaggagatatcctggatacagctgaggcgtaatgag
aagaggattctaaatgacataaacactgataaagaaggtcgccttcgattccatattctt
ggtgaaaatgggaaacggaaaaagcgaattcaatcaagagaggagaagatctttctgttg
gcaaatgactgcttgactggtgatccctcatgtcacgatttgtccctcagccaggacatg
aactctatatgctcaaatgggagtagaattgctaagtgcatgaaaaagtactttacttac
aaaaagaattacaagggagcttttaactccacacttcttgccaaatgcttagatcagaaa
ctgtgggatgacagtcctttcttgctgaaacaacttactggcattggaacagtaacggcg
aaggcattaaactctgcagggataaatactttcggaactttagcagatgctgatccaagg
aggatagaaatagttactaatcgcaaatatccgtttgggaaccatattaaagaatcctta
ttgtcacttcctcctaaagttgagttgagcatcgaggagattggatgccagaggcaaggg
aagtcaaaattagtggtaacattgactcggttatctcaacctgttccagcgacaaagcgt
cattttgccgatatggttgttggttcagaggaagataacctgatcctgtttcacgagaaa
ataagagtggacgagttttccagtccctatagtacaacagttctcgtgtcaagacctgag
caaggaaagttaactgtgagggcggatctgcttttcgaagaatacattggtcttgatctc
cacaaaaacgtcttactggtgaaggaaatcgaatcaaatatgattcgaaaacgtggaggt
tatagaaccacctccacttatgatctgccccaagaaatctacatcgtagacgatgatgac
aagaaaaccacctctcatacttcaacaaaagaacttcacgtgtcacacaagtctacggag
gttttctccatgccaagtttcaatctgctagaggaagaatcggacgaagatgtggccgta
atcaaaaccgaagaaaaagaaagtgaaatcataactgaacagacagtatttgatcacatc
cgaagaaaagctaagaactttccagtttttgccacatcaagtagtgccgattcatcaaca
tccgggaaattggtctcggtgaaaagaagtcaatctccaaaccatgttgaaccccacagt
acaagtcatgtgctggaagaaacaaacgcaagtatgcggagagcgactattaatggtcca
gatatggagcctggagatggtttcagaaaggatgaaactctgaaacatcatgtcaataca
cgacactctgaaacaaattcaagtattcagacatatcctattaatggtccagatatgcag
cttgacggtggtttcagaaaggatgaaactccgaaacatcatgtcaatacccgacactca
agcagctttggtcttctagaggaacacatgaatataggtattgcttccccagaacaaact
gtttttgatcacatacggaagaaagctaagaattttccagcactcacaatagaggccatg
agattggaacctgtggtcccttcaagaaaacgtttctgcctggatcagttcaaaacaagt
atctctgtagaagagcatgaggcagaaatttcgaagattacctcggaagacagtacaacg
attcccgattccagaatgggagatatgggtagacttgtgtatgggaccaatacatatgtg
aaacaacatacttccacgagcagtgcaagaagtgtgagctcacatatactacctaaggtt
ttaggcacccaaactgattcagcagaattaagagatatctctatgtttgacagaataaaa
catacttctcattctataacctctggagatcactatagcggcaaacagcagcagtactca
aatggatcagataggcagttgtgctcattggatatgatagatgagaagaagaaagaaccc
ttctttgggtttaagagtgttttttcatttctctga
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