KEGG   Papaver somniferum (opium poppy): 113296564
Entry
113296564         CDS       T05758                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
psom  Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:psom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:psom03036]
    113296564
   03400 DNA repair and recombination proteins [BR:psom03400]
    113296564
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113296564
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     113296564
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ HEAT_2 DUF7211 Gp-FAR-1
Other DBs
NCBI-GeneID: 113296564
NCBI-ProteinID: XP_026400647
LinkDB
Position
7:18439528..18447253
AA seq 1153 aa
MATSWVRHIESFVDSTRPLTQQNASLDAIATLIKNDLVTIEALVKEMAMYLTTTDNVLRT
RGILLIAEILKCLATKKLDHGTIHSLIGFFTDRLADWQALHGALVGCLALLRRKGSVGVV
IDSDAKALAQSFLKNVQVRSLGKNDRKLCFEILECLFERYPATVATLGDDLLYSICEAID
EEMDPHCLMITFHLVEVLAQLFPDPSGPLAGYAEELFEILGRYFPIHFTHPNSNAFDITR
DDLARALMLAFSSTPLYEPFAIPMLLDKLSSSLPSAKVDSLRYLSDCIVKYGTDRMGKHR
TAIWSSLKAAIFASCQEEPIFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDASVLGLI
FGDKEIDMILSSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLV
DILGLSTENSSRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAED
PWCCLLKEYSGSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFE
RILAILVSVISDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIVVEKVVSLVSV
GESSMPLPLRLEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLE
CYSNKVLSWFHKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMMTAMKLAVAD
CSEETQGLIVQKACSILESSTSFPLKEIISEPNKVLQSSATVYGLPCRDELVISLFASVI
TALRPKTSVTSVREILKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEAL
DIIFNNGLQSALSSYLLKDTPMDNGDTDLLDLCSDVDDSCIGIQANAIVGLAWIGKGLLM
RGHQKLREIVMILLRCLLSTGNQSSLPLEQELLGGYKEDDMILVLIMSAVNAFDVLISDS
RACLNKQFHATIRLLYKQHFFSTMTPILLSSIKDSHSSTTRSMLYRAFGHVISNTPISAV
VTDSKRVISALLDSLSLLSLDDRDKDLMYSLLLVLSGIIMDENGQEAVTENASIIINRLL
GLISFRPMMLVRETAIQCLVAMSGLPHTRIYPMRPQVIQAITSALDDPKRAVRQEAARCR
HAWVSLASGSTRY
NT seq 3462 nt   +upstreamnt  +downstreamnt
atggcgacttcttgggttcgtcacattgaatcgtttgtcgattcaactcgtccccttact
caacagaatgcaagtcttgatgctattgctacacttattaagaatgatctcgtaaccata
gaagcattggttaaagaaatggcgatgtatttgacaactacggataatgttcttcgaaca
agaggcattcttcttatagcagagattcttaaatgtcttgcaacgaagaaattagaccat
gggacgatacatagcttgataggatttttcacagatagattggcagattggcaagctcta
catggtgcactggttggttgcctggcacttttgaggagaaaaggaagtgttggtgtggtc
attgacagtgatgcgaaagcacttgctcagtcttttttgaagaacgtacaagttcgatct
ttaggaaagaatgaccgcaagctgtgctttgagattcttgagtgcctttttgaacgctac
cctgcaacagtcgcgacattgggggatgatcttctttatagtatatgcgaagcgattgac
gaagaaatggatcctcattgcttaatgattacatttcatcttgtggaagttctggcacaa
ttatttccagatccatctggtccactagcaggttatgctgaggaacttttcgaaatcttg
ggacgttacttccctatccatttcactcatcccaatagtaacgcatttgatattacaagg
gatgatttggcaagagctctaatgcttgcattctcttcaactcctctatatgaaccattt
gccattcccatgcttcttgacaagctttcttcttctctcccttcagcaaaggtcgattcg
ctaaggtatttaagcgactgcatagtgaagtatgggactgatagaatgggaaaacacagg
acagctatttggtcgtctttgaaagcagcaatttttgcttcatgccaggaggagcctata
ttttcagggctttcagaggtagatggcaagaagattgatgagaacgaaattgcaaaggaa
gctctaatttgtttgcaaaaattcatcttccaagatgatgcttctgttctgggattgatt
tttggagataaggagatagatatgattctcagttctattataagcagtaagagttacaat
aacatgtcaaaggaaagcaaacagaaactacatgcacttggatgtattctctctacttca
gtgaaagtctccacttcttgttgtaataaggtcttccaaaaattctttcctcgattggtg
gatatccttgggctctctaccgaaaattcatctaggggtttcacttcagatgacactact
ggattttctgaagaactgaattttggagccctttacctgtgcgttgagcttcttattgct
tgcagatgtttgataattggatcgggagaatgtgctccccagcctgtttcagcagaagac
ccttggtgttgcttgcttaaagaatattcaggttcattaaccaatgtgctacattctatt
ctggtaacaagtttgaaaggaaacactagcgaagcttgtattcactatggagtgaagggt
atgcagactctggctacatttccaggatgttcattgcctatatcaaagttgatatttgaa
agaattctggcgatccttgtatcagttatcagtgacagtcttgaagacacatttctctgg
agaattgccttaaatgcgttgagggaagttggcatatttattgaacaatcacatgattct
gagaaggcaaatatctatatggctattgtagtggaaaaggttgtttcgttggtttctgtt
ggtgagtctagtatgccacttccactgcggctagaggctatttctgtcgttggtgcagct
gggaaaagttttatgcttagggtgtctcaagtcttggaagaagccatttcgaagaatctc
ttttctgcatttgtggaaggaaacctgcaatcagctgagattgtaggtccgctgctggaa
tgctactccaataaggtgctctcatggttccataaaagtggagatgttgagaaggttgct
tttcgttttgcttttggaatatggaatcaagtagaaagcaacaagagtttcaacattggt
gaccaaggaaaagagcttcttggtgaaatgatgacagctatgaagctggctgttgcagat
tgttcagaggaaactcagggtttgattgttcagaaagcttgtagcatacttgagtcgagc
acatctttcccattgaaggagatcatttctgaacctaacaaagtgttacagtcttctgca
actgtctatggtcttccatgtagagatgaattggttatctcactgtttgcatcagttatt
acagcacttcgtcccaagacctccgtcaccagtgtgagagaaatattgaagttcttcacg
atcatgcttctaagaggacatgttccatcagctcaagcattaggttctatgatcaataaa
ttgggcgtaaatatcagtaatatgggagtctcaaatgcatgtactttggaagaagcgttg
gacataatcttcaataacggtttgcaaagtgccttgagtagttacctcttaaaagacacc
cccatggataatggtgacacggatcttttggatttatgctctgacgttgacgacagttgt
ataggaatccaagccaatgctatagttggattagcatggattggaaaaggtttgctaatg
cgtgggcatcagaaactaagggaaattgtaatgattctattgagatgcttactttcaact
ggcaatcaaagctccttgccattggaacaggagctgttgggaggttacaaagaagatgat
atgattcttgttctgattatgtctgcagttaatgcatttgatgttcttataagcgattct
cgtgcttgtttaaataaacagtttcatgcaaccataagactactttataagcaacatttc
ttttcaactatgacgccaattctactttcttcaataaaggattcccactcatcaactaca
agatccatgttatatcgggcttttggacatgttatttctaatactccaatttctgctgtt
gtgactgattcaaagagggtcatttctgcattgttggatagtttgtccttgttgagcttg
gatgatcgagataaagatctgatgtacagcctcttgctcgtcttatcagggattataatg
gatgaaaatgggcaagaagctgtaacagagaatgcatccatcattataaatcgccttctt
ggactaatttcattccgccctatgatgcttgttagggagacagcaattcaatgtcttgtt
gccatgtcagggctcccccacacaaggatttatcccatgagaccacaggtaatacaagca
attacaagtgctcttgatgatccaaagagggcagttcgtcaggaagctgctaggtgtcgt
catgcatgggtatctctcgcatcaggaagtactcgttattga

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