Papaver somniferum (opium poppy): 113296672 Help Entry 113296672         CDS       T05758                                  Name (RefSeq) DNA repair protein RAD50-like   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism psom  Papaver somniferum (opium poppy) Pathway psom03440   Homologous recombination psom03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:psom00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     113296672    03450 Non-homologous end-joining     113296672  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:psom03032]     113296672    03400 DNA repair and recombination proteins [BR:psom03400]     113296672 DNA replication proteins [BR:psom03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     113296672 DNA repair and recombination proteins [BR:psom03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      113296672     BRCA1-C complex      113296672    NHEJ (non-homologous end-joining)     MRX complex      113296672 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SMC_N AAA_15 AAA_21 SbcC_Walker_B Rad50_zn_hook AAA_29 ABC_tran AAA_16 AAA_13 AAA_22 Motif Other DBs NCBI-GeneID:  113296672 NCBI-ProteinID:  XP_026400763 LinkDB All DBs Position 7:complement(22125017..22137500) Genome browser AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKHVITFFRPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVKGETETKGQIKLRFKTAVGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQNQEIKTYKLKLENLQTLKDAAYKLRENIALDQEKTNSLKT QLQDLERNIQKMDTKIQQAESTLKDLRNLQDEISTKTTTRSTLFKLQQTQYGALEEENED TDEELLEWQTKFGERIALLDDKIQKLEREMTDTETKRGYLSEAIKESTLEIGKLQHEADE QRKLKYKRDTSIQSLFQKHNLGPLPSIPFSDEVAISLTNRVQTRIADLEKDIQDKKMSND SELQVLWESYVAANMRYSSLEAQKQAKLTAKEGVIKHIKEKEYEREIAEGQLSKYNLSRI DEKEKQMQTEVVKKTHQIEERNFESNINQIGAELYAIGQKIEVLNRERDVLASDSDDRIK LDLKRTELEIRQKKHKKIIDDHKDKIRCMLKGRLPSDKDLKKEITQAVGTLKKEYDDLNS KSIEAEKEVKVLQMKIQDVKINIAKFQKDTDAKKRFVDSKLQSLVQQSYYIDSFPQALQE AMLKRDDKKSKYNIADGMRQMFDPFERVARAHHLCPCCERPFSAEEEDEFVRKQRVKAST SAEHLKVLASESSYADLLFQQLDKLQIMYEEYLKLGKETIPQAERNLKLLNEDLDQKSQA LDDVLGILAQLKSEKELAEALIPPVETAARFSSEMQILQEEIDNLEEKLHVQGQGFKSLE EIKSELKDLERTRNNLDNEKTKLWNEQKYMTSDLSSIQNRWHALREEKGEALIIVDKVKS AEEDLDRLAEDKEQIDLDEKHLLEALIPLSKEKEKLLRDHSELKSKHEQEFEEQSKVKSS YQMELESLLEITSKIKEYNDLRKGERLRELSEKLSLSESQLQNYETKKDEISGELNKSKE LKGSQGQLKRNIDDNLNYRKTKAEVDELEKEIESLEDSILRIGGVSTFEAELKKHKQEKE RLRSELDRSHGTLSVYQSNISKNKLDLKQAQYSDIDKRYFNQLIQLKTTEMANKDLDRYY NALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAGTRSYSYRVLMQT GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVTKNEHQHSIIEAQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacagtggataagatgttgattaaaggaatcaggagtttcgatcctgaaaacaaa catgttatcactttctttagacctttaaccctaattgttggtcctaatggtgccggtaaa acgacgattatcgagtgtttaaagctttcatgtactggagagttacctccaaatgcaagg tctggtcatagtttcatacatgaccccaaggttaagggggagacagaaacaaaagggcaa ataaaacttaggtttaagacggcagtcggtaaagatgttgtatgtattaggtcattccag ttgactcaaaaggcttcgaaaatggagtataaggctattgagagtgttctgcagacaatt aatcctcacactggagaaaaagtttgcctcagctatagatgtgcagacatggatagggaa attcctgcattgatgggcgtttcaaaagctattctggaaaatgttatatttgtgcaccaa gatgaagccaactggccgttgcaagatccttcaactttaaaaaagaagtttgatgatatt ttttctgctactcgatacacaaaagcattggaggtcataaaaaagctccacaaggatcaa aatcaggagattaagacttacaagctgaagctggaaaatcttcaaaccttaaaagatgct gcgtataagcttcgtgaaaacattgcactggaccaagagaaaacaaactctctgaaaact caattacaagatcttgaaaggaacatacaaaagatggatacgaagatccagcaggcagaa tcaacactaaaagatttgcggaatcttcaggacgaaatatcaactaaaaccactaccaga agcactttatttaagcttcagcagacacagtatggtgccctagaagaggaaaatgaagac actgacgaggagttgctggagtggcaaaccaagttcggagaaaggattgcacttttagac gataaaattcaaaagctggagagggaaatgactgatactgagacaaaacgtggataccta agtgaagcaattaaagaatctactctggaaattggcaagcttcaacatgaagctgatgaa cagaggaaattgaaatataagcgtgatacttccatccaaagccttttccaaaagcacaat ttagggccacttccaagtattcccttcagtgacgaggttgccattagcctcacaaataga gttcaaacaaggatcgccgatcttgagaaggacatacaagacaaaaagatgtcaaatgat tcggaactacaagtcttgtgggagagctatgtggctgcaaatatgcgctacagttcatta gaagctcaaaagcaggcaaaattaacagcgaaggaaggtgttattaagcacatcaaggag aaagaatatgagcgagagattgctgagggtcagctttcaaagtataatctgtctcgtatt gatgaaaaggaaaaacaaatgcaaacagaggttgtgaaaaagacccatcaaattgaagag agaaactttgagtccaatatcaaccagattggagccgagctctatgctataggtcaaaaa attgaagtacttaatcgcgagagggacgttctggctagtgattcagatgacagaataaag ttggacctgaagagaacagaactggaaatccgccagaagaagcacaaaaagataattgac gatcacaaggacaaaataagatgcatgcttaaagggaggcttccatctgacaaggatctg aaaaaggaaatcactcaagccgttgggacccttaagaaagagtatgatgacctgaactcg aaatccatcgaagcagaaaaggaggtgaaagtgctccagatgaaaattcaagatgtaaaa atcaatattgccaagtttcagaaagacacggatgcaaagaaaagatttgttgactcaaaa ctacaatccttggttcagcagtcctattacattgactcttttccacaagctttgcaagaa gcaatgctaaaaagagatgacaagaaaagcaaatacaacattgcagatggtatgcggcaa atgtttgatccttttgaaagagttgcacgtgctcatcatctttgtccctgctgtgagcgt cctttctccgcggaagaggaggatgagtttgttagaaagcaaagagttaaggctagtact tctgcagagcatttgaaggttttagcatctgagagttcatatgccgacttattgttccag caattggacaagcttcagataatgtatgaggaatatctcaagcttggcaaggaaacaata cctcaagcagagagaaatttaaaacttctgaatgaagatttggatcagaagtcccaggcg cttgatgatgttttgggaattttggctcaattgaagtctgagaaggaattggccgaagcc ttgattccacctgttgaaactgctgccaggttttcatccgagatgcaaatattgcaggag gaaattgacaacttggaggaaaaacttcatgttcaaggccaaggttttaaatccttggag gaaattaagtcggagttgaaagatctggagagaacaaggaataacctggacaatgagaaa acaaagctatggaatgaacaaaagtatatgaccagtgatctatcgagcattcagaatcgt tggcatgctcttagagaggaaaaaggagaagcattaattatagtggataaagttaaaagt gcagaagaggatttagatcgtttggcagaggataaagagcaaattgatctcgatgagaag catttgttggaggcccttattcctttgtccaaggagaaagagaagttgcttagagaccat agtgagttgaaatcaaaacatgagcaagaatttgaagagcagtctaaagttaaaagcagt taccagatggaattggagtctcttttagaaattacttccaaaattaaagagtataatgat ttaaggaaaggagaaaggctaagagaattaagtgagaaactatctctttctgagtcccaa cttcagaattacgagacaaagaaggatgaaatttctggggagttgaacaaaagtaaagaa ttgaaggggagtcaaggtcaattaaaaagaaatattgatgataatttgaactataggaag acaaaagccgaggttgatgagcttgaaaaagagattgaatcactggaagatagtattctg aggattggaggagtctccacttttgaagctgaacttaaaaagcacaagcaagaaaaagag agacttcgttcagagcttgacaggagtcatggaacattgtctgtttatcagagtaatatt tcgaagaacaaacttgaccttaaacaggctcagtacagtgacattgacaagcgatacttt aaccaactgatccagctcaagacaactgaaatggcaaataaagatcttgaccgctactac aatgcgcttgacaaagcactcatgcgtttccactcaatgaagatggaggaaataaataag ataataagggagttgtggcagcaaacatacaggggacaggacatagattatataagcatt cattctgattcagaaggtgcaggaactcgatcttacagctaccgggtcctcatgcagact ggcgatgcagaactcgaaatgcgtggaagatgtagtgctggtcagaaggttcttgcctcg ctaataatacggttggcattagccgagactttttgcctcaactgtggtatactggctctg gatgaaccaacaacaaacttagatggccccaatgctgagagccttgctgcagctctcctc agaataatggaggataggaaaggtcaggagaactttcagcttattgtaatcactcacgat gaacgatttgctcagctaattggtcagcggcaacatgcagaaaaatactaccgcgtcact aaaaacgaacatcaacatagcattattgaagcccaggagatattcgattga

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