Papaver somniferum (opium poppy): 113296704
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Entry
113296704 CDS
T05758
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113296704
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113296704
Enzymes [BR:
psom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113296704
Protein phosphatases and associated proteins [BR:
psom01009
]
HAD phosphatases
Fcp/Scp phosphatases
113296704
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113296704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
113296704
NCBI-ProteinID:
XP_026400807
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All DBs
Position
7:complement(23385532..23389440)
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AA seq
577 aa
AA seq
DB search
MAKAELAFTNNAAHKLQLALLEGIQDENKLFAAGSLICKRDYEDVVTERSISNLCGYPLC
INSLPLQRPRKGRYRISLKDHKVYDLQETYMYCSSQCVVNSLAFGGSLQDDRCPVVNSSK
VDEVLKLFEEGLSLEEEGLGKKKKGDLGLSELRIQEKMDAKVGEGDWITGPSNAIEGYVP
KQSSAIKRSSKTMSGESKVKLNNSDLKSQVEIPEVSYSASKCGSDINVTDLEEELCAGID
VLLQETTLKSSLKSSGSNKLTHSVTWADEKETDNGNESHGNLCHVQEMGDSQGSAESSGS
QIGEDMDSSVRLASAEACAKALKQAAEVVACGESDASHAVSEAGIIILPQHMNGGNTEMV
ENALEPETVPLKWPTKPGVFNFEVFDSENSWFEPPPEGFSLSLPPFATMYMAVFGWVTSS
SLAYVYGREEDSQEEFLSVNGRSYPYKIVLSDGRSSEIKQTLSGCLARALPGLVMDLRLP
TPVSFLEQGMSRLIETMSFVDALPSFRMKQWHVIVLLFMDALSVCQIPGLSSHMTGTRML
THKVLDGAQISSEEYELLKDHIIPLGRLPQFSTQSGG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctgaattagcatttacaaataatgctgcacacaagctacaacttgcactt
cttgagggtatacaagatgaaaacaagctgtttgcagctgggtctttgatttgtaaaagg
gattatgaagatgtggtgactgaaaggtcgatttctaatctatgtggttatcctctttgt
attaattccttgccattacagcggcctaggaaaggacggtatcgtatttctttgaaagac
cataaggtttatgaccttcaagagacttacatgtattgttcttctcagtgtgttgttaat
agtttagcttttgggggtagtttgcaagatgatagatgcccagtggtcaattcgtcaaag
gttgatgaggttctcaagttatttgaggagggtttgagtttggaagaagagggtttgggg
aagaagaagaagggtgatttgggattatccgagttaaggattcaggaaaaaatggatgcc
aaggttggggaaggggattggatcactggtccatcaaatgcaattgaagggtatgttcct
aaacagtcttctgctattaaacggagttcgaaaacaatgtcaggggaatcaaaagtaaaa
ttgaacaattcagacctgaaaagtcaggttgaaattcctgaagtatcttactctgcatcc
aaatgtggttcagatataaatgttactgatttagaagaagagctgtgtgctggaatagat
gtcctgttacaggaaaccacattgaaatcctccttgaagtcttcaggttcaaacaaattg
acccacagtgttacatgggctgatgaaaaagaaactgataatggtaatgagagccatgga
aatctttgtcatgttcaagagatgggtgactcacaaggtagtgctgaaagctcaggtagt
cagattggggaggatatggacagttctgtacgtttagcatcagcggaggcatgtgcaaag
gctttgaaacaagcagctgaagttgtggcttgtggtgaatctgatgccagtcatgctgta
tctgaagctgggatcattatcttgccacaacacatgaatggaggaaacaccgagatggtt
gagaatgccctcgaaccagaaacagtgcctctaaaatggcccacaaagcctggtgttttc
aattttgaggtgtttgattctgaaaattcatggtttgaaccgccacctgagggctttagc
ttaagtttaccgccatttgccacgatgtacatggcagtttttggatgggtaacatcatct
tctctggcttatgtatatgggcgcgaagaagattctcaagaagagtttttatctgttaat
gggagatcgtatccttacaaaattgtcttgagtgatgggcgctcttctgaaattaagcag
actctgtctggttgtcttgcccgagcattgccaggacttgttatggatttaaggctgccg
actccagtatctttcctggagcaaggaatgtcccgcttgatagagactatgtcgttcgtc
gatgcgcttccatcgttcagaatgaaacagtggcatgtgattgttcttttatttatggat
gctctctcggtgtgtcaaattccaggactctcatcacacatgacaggcacgaggatgtta
acacacaaggttctggatggtgcccagataagcagcgaagagtacgagcttttgaaggat
catattattccacttggcaggctaccccaattctctacacagagtggaggttga
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