Papaver somniferum (opium poppy): 113296737
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Entry
113296737 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113296737
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113296737
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113296737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Rtf2
zf-RING_10
zf-Nse
Zn_ribbon_6
zf-RING_4
RING_XB3-XBAT31
DUF4106
Rad50_zn_hook
zf-ANAPC11
Sina_RING
zf-RING_6
zf-P11
Motif
Other DBs
NCBI-GeneID:
113296737
NCBI-ProteinID:
XP_026400849
LinkDB
All DBs
Position
7:complement(25235811..25240442)
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AA seq
244 aa
AA seq
DB search
MDTRDPRRTLRGHAKEARRRKSVLQIDLNDTPPAEIRAAAALVECSQQGGGGGGGGGGGR
ERIPLQPPPLTIDLEAIDDEVVISSPRSFAEAKRNKAFRNLEILITAERPAPPPPPRESR
IDGTGSTLNSSYNMRKRPAASNAVINCDHYINLDGRSSSKKKCAVKPAVTPQAAPPKPPA
KEPAFSCPVCMSSLVEATSTKCGHIFCKQCIKSALSAQNKCPTCRKKLTMKDTIRVYLPA
TEMS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatactcgcgatccgaggaggacactgaggggtcatgctaaggaggctaggagaagg
aaaagtgtcttacaaattgatcttaatgatacacctcccgctgaaattagggcagctgct
gctttggttgagtgtagccaacaaggaggaggtggaggaggaggaggaggaggaggaaga
gaacggattccgctgcaaccaccacctttgacaattgatcttgaagctattgatgatgaa
gttgtcatttcatctccaaggagctttgctgaagcgaaaagaaacaaggcatttaggaac
ctggaaattttaattactgccgagagaccagcacctccacccccaccccgtgaaagtcga
atagacggaactgggtcgactctgaatagcagctacaacatgcgcaaaagacctgcagca
agcaatgcagttattaattgtgatcattacataaacctggatggaagaagcagttccaag
aaaaagtgtgctgtgaagcctgcggtaacaccccaggctgcgccaccaaaaccaccggca
aaggagcctgcattcagttgtccagtttgcatgagttcacttgtggaggcgacatcaaca
aagtgtggccacattttctgcaaacagtgcatcaagtccgccttatcagctcagaataag
tgtccaacatgcagaaaaaagctcacgatgaaagatactatcagggtctaccttcctgcc
actgaaatgagctga
DBGET
integrated database retrieval system
