Papaver somniferum (opium poppy): 113296795
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Entry
113296795 CDS
T05758
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113296795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113296795
04121 Ubiquitin system [BR:
psom04121
]
113296795
03036 Chromosome and associated proteins [BR:
psom03036
]
113296795
03400 DNA repair and recombination proteins [BR:
psom03400
]
113296795
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
113296795
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113296795
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113296795
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113296795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
MATH
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
TRAF_BTBD17
DUF1283
Motif
Other DBs
NCBI-GeneID:
113296795
NCBI-ProteinID:
XP_026400919
LinkDB
All DBs
Position
7:complement(27607755..27613413)
Genome browser
AA seq
432 aa
AA seq
DB search
MQKNTTRNVQKEHADDVPSSSKFQWKIENISKLNDENRFSPIFKIGPHKWRLLAFRRGCN
TNGYLSIYVVAIECKEWQFVKFSLSVVDQTNNKNTLRKDTEDMFRFTKDESDWGFDEFIQ
LKELKDPSNGYIVNDACITEVEFCLDSIQDFKEELVPMEHMEFVEERDLVTMSTQQCDSH
RKLDKKINKQLADKVSVAKFQEKSFCIETTASTSTLLANTSVCLDYDSDFICAFCQTSTV
SKGSGSMLHIANGEEVKEDEVSAGPNVIHVHRKCVELTPRVYYVGKTVMNLELELTRVSK
IKCCCCGLKGAALGCFMRSCKNAYHVPCAFDTSGCRWDDEGRLMLCPSHSGAKFSHEKTK
KGKFLVKDNSSAIQSMDELNMDEMLDRLDVVSSMNCSEHVCQDVTKSPRKVSFRGSLNDI
EEYYNIVVKDNP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaatactaccagaaatgtacaaaaggagcatgcagacgacgtcccttcatct
tcgaaatttcaatggaagattgaaaacatttcaaaattgaatgatgaaaatcgtttctca
cctattttcaaaataggtcctcataaatggcgattgctggcttttcgcaggggatgtaat
acaaacggttacttgtcaatctacgtggttgctattgaatgcaaggaatggcaatttgtg
aaattcagtttgtccgttgttgatcaaacaaataacaaaaacacattgagaaaagacaca
gaagacatgttccggttcaccaaagatgagagcgactggggttttgatgagttcatacag
ttaaaagaactcaaagaccctagcaatgggtatatcgtgaatgatgcttgtattactgaa
gttgaattctgtttagactcaatacaagattttaaagaggagttggtgcctatggaacat
atggaatttgtcgaggagcgggatttagttacaatgtcaacacaacaatgtgattcacat
aggaagctagataagaaaatcaataaacaactagcggataaggtatcagtggcaaagttt
caagagaaatcgttttgtatcgagaccactgctagtaccagtaccttactagctaatact
tcagtatgtctggattacgattcagattttatttgtgcattttgccaaacctctacagta
tcaaagggctctggatccatgttgcatattgccaatggagaagaggtaaaagaggatgag
gtatctgctggaccgaatgtcatacatgttcaccgaaaatgcgtagagttgacgcctcga
gtatattatgttggtaaaactgttatgaacttggagctggagctgacaagagtttcgaag
atcaaatgttgttgttgtgggttaaagggtgcagctcttggctgttttatgcgttcttgc
aagaatgcttatcacgttccttgtgcatttgacacttcaggttgcaggtgggatgatgaa
ggtcgtctaatgttatgtcccagccattctggtgcgaagttttcacatgaaaaaaccaag
aagggaaagtttctagtgaaggacaattcttcagccattcaaagcatggatgaattgaat
atggatgaaatgctagatcggttggatgtagtttcatcaatgaattgtagtgaacatgta
tgtcaagatgttactaaatcccctcgcaaagtaagctttagaggtagtttgaatgatatc
gaagagtattacaatattgtagtgaaagataatccgtaa
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