Papaver somniferum (opium poppy): 113297136
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Entry
113297136 CDS
T05758
Name
(RefSeq) axial regulator YABBY 1-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113297136
Transcription factors [BR:
psom03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
113297136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_Elf1
Zn_ribbon_Com
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
113297136
NCBI-ProteinID:
XP_026401331
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All DBs
Position
7:43913543..43917818
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AA seq
240 aa
AA seq
DB search
MSSSISSSSSSSSCLDHLMNISPSPSDQLCYVQCNFCDTVLAVSVPCTSLFKTVTVRCGH
CTNLLSVNMRGLHLPTPTPSTNNNANNNNCHLQLGHDFFSPSFNILEEMQHQSVQTPNLS
LMNQRNENASIVSSVRGGYDQLPKAPPVNKPPEKRQRVPSAYNRFIKDEIQRIKAGNPDI
THREAFSAAAKNWAHFPHIHFGLMPDQSTKKTNVRQQERDDLLLKDGFFSATTNIGVSPY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcaatatcatcttcttcttcatcttcttcttgtttggaccaccttatgaat
atctctccttctccttcagaccagctctgttatgttcaatgcaatttctgtgatactgtc
cttgcggtaagtgttccttgtactagtttgttcaagactgttacggttcgatgcggtcac
tgtacgaatcttctctccgttaacatgcgaggattacatctacctacaccaacacctagc
actaataataatgccaataacaacaactgtcaccttcagcttggccatgattttttctct
ccttcctttaacattctggaagagatgcagcatcaaagtgtgcagacgccaaacttgtct
ttaatgaatcaaaggaatgaaaatgcatctattgtatcttccgtaagaggaggatacgac
cagctcccaaaggcaccccctgttaacaagcctccggagaaaagacagagagtcccctca
gcgtacaatcgattcatcaaagatgaaatacaacgcatcaaagctggtaatcctgatatc
acccacagagaagccttcagtgctgctgctaagaattgggcccactttccccacatccac
tttggtctgatgcccgaccagagtacgaagaagactaatgtgcgccagcaggaaagagat
gatcttcttctgaaagatggctttttttctgcaaccactaatattggtgtctccccttac
taa
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