Papaver somniferum (opium poppy): 113297173
Help
Entry
113297173 CDS
T05758
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00061
Fatty acid biosynthesis
psom00071
Fatty acid degradation
psom01100
Metabolic pathways
psom01212
Fatty acid metabolism
psom04146
Peroxisome
Module
psom_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
113297173
00071 Fatty acid degradation
113297173
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113297173
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psom01004
]
113297173
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113297173
Enzymes [BR:
psom01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
113297173
Lipid biosynthesis proteins [BR:
psom01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113297173
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of breast milk
113297173
Exosomal proteins of breast cancer cells
113297173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
113297173
NCBI-ProteinID:
XP_026401374
LinkDB
All DBs
Position
7:45716856..45726689
Genome browser
AA seq
659 aa
AA seq
DB search
MGDKKFIVEVEKAKESVNGKPSMGPVYRSLFAKDGFPEPVEGLESCWDIFRISVEKYPDN
RMLGRREIVDGEPGKYLWLTYKEVYGIVMKVGFAIRSCGVEKGGRCGIYGINCPEWVMSM
EACNAHGIYCVPLYDTLGAGAVEFILCHAEVSVVFVEETKISEVLKTFPNTSEYVKTIVS
FGKVKPEQKEVAENLGLRIYTWDEFLHLGVNKECELPVTTKTDISTIMYTSGTTGDPKGV
MITNDSIVSYIAGTKLLLKSTNEEMSDKDVFISYLPLAHIFDRVIEELLIHHGAAIGFWR
GDVKLLIEDIGELKPSIFCAVPRVLDRIYLGLTEKIASGGFLKHKLFDIAYSLKLSSMMK
GNKHEEAAPICDKIVFSKVKQRLGGNVRLILSGAAPLAAHVESFLRVVTCAHVVQGYGLT
ETCAGTFVSMPNEISMLGTVGPPVPNVDVCLESIPEMGYDALSSTPRGEICVRGKPVFQG
YFKREDLTKEVMVDGWFHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYGL
VSAIDSIWVYGNSFEAFLIAVVNPNKQALERWAEDNGVEGDFDIVCGNSKAKEFIISELS
KIGKEKKLKGFEFVKAVHLDPVPFDMERDLLTPTYKKKRPQLLKYYQSIINGMYKSGGK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggagataagaagttcatagttgaagtcgaaaaggccaaagaatctgtaaatggaaaa
ccttcaatgggacctgtttatagaagtttgttcgcaaaagatggatttcctgaaccagtt
gaaggtttagagagttgttgggacattttccgcatttctgttgagaagtatcctgataac
cggatgcttggtcgccgtgaaatcgtggatggagagccaggtaaatatctgtggctaact
tataaggaagtgtacggcattgttatgaaagttggatttgccatccgcagttgtggtgtt
gagaagggaggacgttgcggtatttatggcatcaattgtccagagtgggttatgagtatg
gaggcttgcaatgctcatgggatctactgtgttccattgtatgacacacttggtgccgga
gctgtggaatttattctgtgccacgctgaggtttcagtagtgtttgtggaagaaacaaag
atttctgaggtgctaaaaacttttccgaatacaagtgaatatgtcaaaacaattgtgagc
tttggcaaggttaaacctgaacaaaaagaagtggctgaaaatcttggcttgagaatatat
acttgggatgaattcttacatctgggagtgaataaggaatgtgaacttccagtgaccaca
aaaactgacatatctacaataatgtacactagtggaactactggagatcccaagggagta
atgattaccaacgatagcattgtttcctatatagctggtacgaaactactattaaagtcc
accaatgaggagatgtccgacaaggatgttttcatttcgtatctccctctggcacacata
tttgatcgagtgattgaagagttgcttattcaccacggtgctgcaattggattttggcgt
ggggatgtcaaattgttgatcgaagatattggggagctaaagccaagtattttctgtgct
gttccgcgtgtgctagataggatttatttgggtttgacagaaaaaattgcttctggaggt
ttcttgaagcataagttatttgacattgcatactcgttaaaactaagtagcatgatgaaa
ggaaataaacatgaagaagcagctcccatatgtgacaagattgtctttagtaaggtaaag
caacgattaggaggaaacgttcgacttattttatctggagcagcgccacttgcagcacat
gttgaatcttttctacgagtggtgacatgtgctcatgtcgttcaaggatatggtctgacg
gaaacatgtgctggaacttttgtttcaatgccaaatgaaatatctatgcttgggacagtt
ggacctcctgtaccaaatgtcgatgtatgtttggaatccatccctgaaatggggtatgat
gctctttcgagcacaccacgtggagaaatatgtgtgcgggggaaacccgtgttccaagga
tacttcaaacgagaagacctcaccaaagaggttatggttgatggatggttccacacaggg
gatgttggtgagtggcagccaaatggtagcatgaaaatcattgacaggaagaaaaacatt
tttaagctttcacaaggagaatatgttgcggtcgagaacttagagaatatttacgggctt
gtttctgctattgactcgatatgggtatatggtaacagctttgaggctttccttattgct
gttgtcaaccccaacaagcaagcacttgagcgttgggcagaagacaatggagtagaaggg
gatttcgatatagtctgtgggaattcaaaggccaaagaattcatcatcagtgaacttagc
aaaattggaaaagaaaagaagttaaaaggtttcgagtttgttaaagctgtccacttagac
ccagttccatttgacatggagcgtgatcttctcactcctacttacaagaagaagaggcct
cagctgctcaaatactatcagagcatcatcaatggtatgtacaaaagtggaggcaagtaa
DBGET
integrated database retrieval system
