Papaver somniferum (opium poppy): 113297235
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Entry
113297235 CDS
T05758
Name
(RefSeq) protein transport protein SEC16A homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113297235
Membrane trafficking [BR:
psom04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113297235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
113297235
NCBI-ProteinID:
XP_026401446
LinkDB
All DBs
Position
7:48959002..48967401
Genome browser
AA seq
1558 aa
AA seq
DB search
MAFPPSQLEEADDDFFDKLVDDDEFGVTSTTVTSVVGSSGMDGGSDSDEVRAFANLSMDE
VPTVSADTTSGAGFGVSVEEEKKSEDGVVALSSDDKTEKGSVDQEESVSHVGSTSAVLDN
HFETRDVSKTAEVSLDTSTSNNSGSKSTCVKEFQWSSFYADGDEKGGSGFGSYSDLLCDD
PFENIGKNTGVDSNNSVDPYADIGNNALVDSNHRSGTVENEVYGSTSSLSLKQNNDARTY
TSGSEQTNNEQDAYIAQPVQYPGWEYGVTTGTSIPDSTISNQANYEDTAQATSADVVSTQ
CSEASFLQQTTQSVGGTLDEGCTTGSVANWNQASQGTMVYPAHMIFDPQYPDWFYDSIAK
QWYPLASYTQASQWGSYAQADQSESYMQADQSGSYTHDGQSGSYTHDGQSGSYTHDGSYS
QASQAGSYTQAGHLESYTQAGQLESYTQAGQLESYTQAGQSGSYDQAGQSESYGLAAQSE
SYSQAGQPTPSTEDQMSQNGNAFVSSFTPVRDQGTFNDYGKVEAYESQGNRSEAHGGDQP
GNYVQQNTNMWQPKTMVKSNSLASYTENQHSETLYNSRVYSSDSLDQQISFKSVLTASYE
QQQTSRSYGGNERVGSFPSFVPTDNFSHQMNQPMVEQNNQMTASHGFYGNQNIGRYSQQT
FPSSTQTSHTPQDGRSPHGRPPHALVTFGFGGKLVVVKDSSALGSSTAYASKDCIGGSIS
VLDLMDTVTNKNGASNIDFGGSGYFRILCHQSFPGPLVGGNSGNKELNTWIDERITECAS
LNVDYRNGELLRLLLSLLKIACQHYGKLRSPFGSDPSLKENDRPESAVAKLFASAKSSSS
QLSGYASQRHCLTNVPSEGQLRATAAEVQNLLVSGRTKEALQCAQEGQLWGPALILAAQL
GDQHYIESVRQMAHCQLVAGSPLRTLCLLIAGQPADVFSADSTGKSGGSPDALHMSQQHA
QGGANGMLDEWEENLAIIAANRTKGDELVVLHLGDCLWKERGEITAAHICYLVAEANFES
FSDSARLCLIGADHWRCPRTYASPEAIQRTEFYEYTTVLGNSQSVLLPFQPYKLVYAHML
AEVGKVSESLKYCQAITKSLKNGRAPEVETWKQLVSSLEERVRTHQQGGFGINLAPGKLV
SKFLPFIDRSIHRMIGPPPPSASSTKSNDQDNRPPIPRVPASQSTMAMSSLMPSASVETI
SEWAGDSNRRSMPNRSVSEPDFGRQANSSKGGASADGQSKASGAGGSSRFGLLGSTIFQK
TIGWVGRSRSDKQAKLGESNKFYYDEKLKRWVEEGANVTAEESAPPPPPTNAVFQNGTTD
YNMQHAFRNDSPANNGVAESRSPTHSERSSGIPPIPSSSNQFSSRGRMGVRSRYVDTFNK
GGGVSANLFQSPPAPVANPIGTSNAKFFVPAPAPTPSSSGEQPIAATGEIMQESPGPSED
ISSVMTNDSFYSSQQPTPPPSSSSSPSMQRFASMSNIPTASRIAGNGNSTAQSRSRRTAS
WSGSINDANSSSPYTNGSRPLGEVLGYSPTSSNPNDPSSIHLTRNGSSFGSDLQEVEL
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcctccatctcaactggaggaagcagatgatgatttttttgataagcttgtc
gatgatgatgaatttggggttacgtcaactactgtgacatctgttgttggttctagcggt
atggatggtggttcagattctgatgaggtgagagcatttgcaaatttaagtatggatgag
gttcctactgtgtcagcagatacaactagtggtgctggatttggggtttccgtagaagag
gaaaagaaatcagaggacggggttgttgcattgtcttctgatgataagactgaaaaggga
agcgtggatcaagaggagagtgtctcacatgttggttccacttcagctgttcttgataac
cattttgagactagagatgtatcgaagacggctgaagtttcattagacacgtcaacgagc
aataatagcggatctaagagtacatgcgttaaagaatttcagtggagttccttttatgct
gatggtgatgagaagggtggcagtggttttgggtcatactcggatttattatgcgacgat
ccttttgaaaatatcgggaagaatactggagttgattccaacaactcagttgatccttat
gcagatatcgggaataatgcactagttgattccaaccatagatctggcacggtagaaaat
gaagtttatggttctacatcatcactaagtttaaagcagaacaatgatgctagaacatat
acatcaggaagtgaacagacaaataatgagcaagatgcctacattgcccaacctgttcag
tatcctggttgggaatatggcgtaaccactggtacatcaattcctgactcaacaataagt
aaccaagcaaattacgaagatacagctcaggcaacaagtgctgatgttgtttcaacccag
tgctcagaagcttcatttttacagcaaacgactcaatctgttgggggtaccctagacgag
ggttgtacaactggcagtgttgcgaactggaatcaggcttcccagggaaccatggtgtat
ccagcacatatgatttttgatccacaataccctgattggttctatgatagtattgccaaa
caatggtacccgttagcatcttatactcaggctagtcagtggggatcttatgctcaggct
gatcagtcggaatcctatatgcaggctgatcagtcaggatcttatacccatgacggtcaa
tcaggatcttatacccatgacggtcagtcaggatcttatacccatgacggttcttattcc
caggctagtcaggctggatcttatacccaggctggtcatttagaatcttatacccaggct
ggtcagttggaatcttatacccaggctggtcagttggaaagttatacccaagctggtcag
tcgggatcttatgatcaggctggtcagtcagaatcttatggtctggctgctcagtcagaa
tcttatagtcaggctggtcagccgacaccttcaactgaagaccagatgtctcagaacggt
aatgcttttgttagcagtttcacccctgtgagagaccaagggacatttaatgactatgga
aaagttgaagcctatgaatcgcaaggtaatcgaagtgaagcccatggtggtgaccagcct
ggtaattacgttcagcagaataccaatatgtggcaacctaagacaatggttaagagtaat
tctctcgccagttacacagaaaaccagcattcagagactctatacaattcaagggtttat
tcaagcgattccctggatcaacaaattagtttcaaatctgtcctaactgcttcatatgag
cagcaacagactagtcgtagttatggtgggaatgaaagggtgggttcattcccgagcttt
gttcccactgacaatttttcacatcagatgaaccagccaatggtggagcagaataaccag
atgactgcttcacatggtttttatggcaatcaaaatataggaaggtattcccaacaaacc
tttcctagtagcactcaaacatcacatactccacaagatgggaggtctccccatggtcgt
cctcctcatgccctggttacttttggttttggtggaaaactcgtagttgtgaaagatagc
agtgctcttggttcaagcacggcgtatgcaagcaaggactgcataggaggttccatttca
gttcttgacttgatggatactgtcaccaacaaaaatggcgcgtcaaacattgattttggt
ggttcaggttatttccgtattctgtgccaccaatcctttcctgggccgctggttggtgga
aatagtggaaataaagaattaaatacttggattgatgagaggattacggagtgtgcatca
ttgaatgtggactataggaatggagaacttttgaggttgcttctttctttgttaaaaata
gcttgccaacattatggtaaacttcggtctccttttggttcggatccatctttgaaggaa
aatgatcgtcccgagtcagctgttgcaaaactttttgcttcggctaaaagtagtagttct
cagctaagtgggtacgcctcccaaaggcactgcttaacaaatgtgccttccgaaggtcaa
ctgcgggcaaccgctgctgaggtacaaaaccttcttgtttctggtagaacaaaagaggcc
ctacaatgtgcacaggaaggtcagttgtggggacctgctcttattcttgcagcacaactt
ggtgatcagcattatattgaatccgtgagacagatggctcattgccagttagtagctggt
tcacctttgcgtacattgtgcttgctaattgcggggcaaccagcagatgtgttttctgct
gatagcacgggtaaaagcggtggttcacccgatgctttacatatgtctcaacagcatgca
cagggcggtgccaacggaatgctagatgaatgggaagagaatttggccatcatagctgca
aacagaacaaaaggtgatgaacttgtagtacttcatcttggggattgtctctggaaggag
agaggcgagattactgctgcacacatctgctacttagttgcggaagcaaacttcgagtcg
ttttctgacagtgcaagattgtgtcttattggtgctgaccactggagatgccctcgaaca
tatgcgagccctgaggctatacagaggacagaattttatgaatatacgacggtgctcggg
aattctcaatccgtcttgctaccatttcagccgtataaacttgtatatgcccatatgctg
gctgaagtgggaaaagtttcagaatctttgaagtattgtcaagcaataacaaaatctctg
aaaaatggccgagcaccagaagtggagacatggaaacaattggtctcatcactggaggag
cgagttaggactcatcagcagggaggattcggtatcaacttggctccaggaaaacttgtt
agtaaattcctcccatttattgatagatctattcaccgaatgattggaccaccaccacca
tcggcctcgtcgactaaaagtaatgaccaggataaccgtccaccaataccccgtgtacca
gctagtcaatcgacaatggccatgtcatctttaatgccttcggcctcagtggaaactatt
agtgaatgggcaggtgatagtaataggaggagtatgcccaataggagcgtttcagagccg
gattttggtagacaggctaattcatcgaagggtggagcttctgctgatggacaaagcaaa
gcatcaggtgcaggtgggtcatctcgctttggtcttttggggtcaacaattttccaaaag
accatagggtgggtcggaagatctaggtcagataaacaggcgaagttgggtgaatcgaat
aaattttactatgacgagaaactcaagagatgggtagaggaaggtgctaacgttactgct
gaggaatcagcgccacctccacctccaacaaatgcagtttttcagaatggaacaacagat
tacaacatgcagcatgcatttagaaatgacagtcctgctaataatggagttgctgaaagc
agaagcccaactcattcagaacgaagttcagggatacctccaattccatcgagctctaac
caattctcttcccgtggccgaatgggtgttagatcaaggtacgttgacaccttcaataaa
ggtggcggggtctcagcaaacttattccagtcccctcctgctccagttgcaaatccaatt
ggcactagcaatgcgaagttttttgttccggctcctgcacctacaccctcatcatctggg
gaacaaccaatagcggcaacaggtgaaattatgcaagaaagtcctggccctagtgaagat
atctcatccgtgatgactaatgattcattttattcatctcaacaaccaacaccaccacca
tcatcatcatcatcgccatccatgcagcgttttgcaagcatgagcaacatccccactgcg
agcagaatagctggtaatggtaattccactgctcaatctcgttcgcggagaacagcgtca
tggagtggaagcattaatgatgcaaatagctcttctccgtatacaaatggatcgagacct
ttaggagaggttttagggtattcgccaacatcttcgaatcccaatgatccttcatccatt
catctgacgaggaatggttcaagttttgggtcagacctccaagaggtagagctctga
DBGET
integrated database retrieval system
