Papaver somniferum (opium poppy): 113297348
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Entry
113297348 CDS
T05758
Name
(RefSeq) SUPPRESSOR OF ABI3-5-like isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113297348
Spliceosome [BR:
psom03041
]
Complex A
Other components
Complex A specific factors
113297348
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
DUF3008
Motif
Other DBs
NCBI-GeneID:
113297348
NCBI-ProteinID:
XP_026401564
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All DBs
Position
7:54615476..54623717
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AA seq
1070 aa
AA seq
DB search
MDPGRYVHQQGWDNNSALEGYPAVHEPDFRGGGTYNGRRFIDEGFPRERTYPRNAFHQDI
LERDNYAPPPAVGSWPQPRRKGFDDESALARDSRRYEKPYGDSLLEMDRFRESDKYRGID
NFQETDKFQDNYRGSDSYHNHGFDRSARFSGRSRADFLPDDYDYRHRISRSREDSHERDY
DYNRSSYDSDYDRGSKGDDSWKRRDSRRIRDKKSSSREKDQSPPRKRERSWSRGRDDRQR
SRSPRGRSHGRSHREDNYDEGRHERSERRRDRDDRRSHESSSSFPSATVVVKGLSQKTTE
EDLYQILAEWAPLRHVRVIKERNSGSSRGFAFIDFPSTVSARTMMDGIGDDGLVVDGRKL
FFEYSSKPTGGTGAPSYGQGSPMKSSHGNRSLPPSDWMCTICGCVNFARRTSCFQCNEAR
SDDAPAADEASSNSTGRKGPDAGPTHVLVVRGLDENADEEMLRYEFSKHAPIKDLRLVRD
KFTHVSRGFGFVHFHSVEDATKALEATNGTTLEKNGQLLRVAYAKSIHGPGPGGSQSSSL
AAAAIEAATFAQQYDAVGWAPKEYNPDAKHSASGQEQQGGGEQADPKDDSAVQSGFVWDE
ASGYYYDASSGFYYDGNSGLYYDGNNATWYSYDHQSQQYVPCTDQDDNKASGKPSNDTSS
KALDGANSNKRVVISAPAATISSNEKVASSLPDAVQAAAAAALAAEKREKEKVKEIKLAS
KGSILANKKNLNNVLTKWKQRNHESQAARVVLDDNQPSAATDAKAKFKADAITTKDYPTS
SSALVPGSVGRDASNISSIAVAAQVESSAKPRPIMGVIRGSGRGTVKSDTVYSGSLCGVP
TPTAVGSSGGSSVNLETPAAATPFKTDVSALGSYTPPVVAGSGKRRFSEMPIQQASSQKE
QQVQTTYRDRAAERRSLYGSSSSLGDDQSDLGLGDSNRHSRKGSLLDPSVMPFPPGVGGG
RVADVNSNVESFEVITADKAIGESNKGNRMLRNMGWQEGLGLGKDGSGITEPVQAEGMDR
RAGLGSQQKKDPRLKIFFQVNLFKPSFNRVWVHGAQVHKHKCDVDSGIAW
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacgttatgtacatcagcaaggatgggataataacagcgctctggagggg
tatcctgcagtgcatgagccagacttccggggtggtggtacatataatggtagaaggttt
attgatgagggattcccaagagagcgcacctaccctaggaatgcttttcatcaagacata
cttgagagggataattatgcacccccgccagcagttggctcttggcctcaaccaagaagg
aaaggttttgacgatgaatcagcactagcaagagattcaagacgatatgagaaaccttat
ggggattccttacttgaaatggacagatttcgtgaatctgataaatatcgcggaattgat
aattttcaagaaacggataagtttcaagataactatcgtggcagtgacagctaccacaat
cacgggtttgataggtctgcgaggtttagtggacgtagccgtgctgattttctgccggat
gattatgattataggcatcgtatctcccgtagcagggaggatagccatgaaagagattat
gattataatcggtccagctatgattctgattatgacagaggcagtaagggagatgatagt
tggaagaggcgtgattctcgtcgtatacgtgataaaaaaagttcgagcagggagaaagat
caaagtccacccaggaaacgtgagcgttcttggtcccgtggacgtgatgatcgccagaga
tcaaggtctcctagaggtcgcagccatggtcgaagtcaccgggaggacaattatgatgaa
gggaggcatgagaggagtgagaggcgaagggatcgtgatgatagacgaagtcacgagtct
tcttcatcgtttccatctgctacagttgtggtgaagggcttgtcacaaaagacaactgag
gaagatctttatcagatcctagcagaatgggcccccctacgtcatgttcgagttataaaa
gaacggaattctggctcttcccgtggatttgcatttattgactttccttctacggtatcg
gctcgtactatgatggatggaatcggagatgacggtctcgttgttgatggaagaaaacta
ttttttgagtacagtagcaagccgactggtggcacaggtgcaccttcttatggacagggc
agtccaatgaaatctagtcatggtaatagaagtttgccgccatctgattggatgtgcact
atatgtggttgtgtgaattttgcaaggcgaacatcctgtttccagtgtaacgaggcaaga
agtgatgatgctcctgctgcagatgaggcatcatctaattctacaggaaggaaggggcct
gatgctggtcctactcatgtattagttgtccgtgggttggatgagaatgcagatgaagaa
atgcttcgttatgagttttcaaagcatgctccgattaaggatcttcgtcttgttagagac
aaatttacgcatgtgtccagagggttcggctttgttcatttccattcggtggaggatgct
acaaaagctctagaagcgacaaatggaaccactcttgaaaagaatggtcagctcctacgg
gtagcatatgcaaaaagtatacatggacctggaccagggggatcacaatctagcagccta
gctgcagctgctattgaggcggcaacgtttgctcaacagtatgatgctgttggttgggca
ccaaaagaatataatcctgatgcgaaacactctgccagcggacaggagcaacaaggcgga
ggcgaacaggcagatccaaaagatgattcagccgttcaatctgggtttgtttgggatgaa
gcatccggttattattatgatgcctcttctggattctactatgatggcaattcaggtctt
tattacgatggtaacaacgctacctggtactcgtatgatcatcaaagtcagcaatatgta
ccttgtactgatcaagatgacaacaaggcatctgggaagccatcgaatgatacatcatcc
aaagccttggatggcgctaatagcaataaaagagtagttatatctgcacctgctgcaaca
atatcatcaaatgagaaggtggcatcatcattacccgatgctgtccaagctgctgctgca
gcagcattagcggcggagaagagggagaaagagaaggtaaaagagataaaattggcttcg
aagggcagtattctggcgaacaagaagaatttgaataatgttttaaccaagtggaagcaa
agaaatcatgagagtcaggctgcgcgcgttgttctcgatgacaatcagccatctgctgca
acagatgcaaaagccaagttcaaagctgatgctataactacaaaagattatcctacaagt
agctctgctcttgtgcctggatctgtaggtcgtgatgcatctaatatctcatctatagct
gttgctgctcaagtggaatcttcggctaagccaaggccaataatgggagtgattaggggc
tctgggagagggacggtgaaatcagatacagtgtattcgggttcactgtgtggagttccc
acaccaactgctgtgggcagctctgggggatcatcagtgaacctagagactccagctgct
gccactcctttcaaaacagatgtctctgcattgggctcttatacaccacccgtggttgct
gggagtggtaagaggaggttttctgagatgccaattcaacaggcttcatctcaaaaggaa
caacaagttcaaaccacatatagagaccgtgcagctgagaggaggagcttgtatggatca
tcatcatcgcttggagatgatcaatcagaccttgggctaggggattcaaatcggcattcc
agaaagggttctttgttggatccatcggtgatgccctttcctcctggggttggaggtgga
cgcgttgcagatgtcaatagcaatgttgagagttttgaagtgatcaccgctgataaagcg
attggtgagagcaataaaggcaaccggatgttgcgcaacatgggatggcaggagggcttg
ggacttggaaaggacggtagtgggataacggagccagtccaggctgaagggatggatcga
cgggcaggactcggtagtcagcaaaagaaagaccctcgtctgaagattttttttcaggtg
aacctatttaaaccctcttttaatcgtgtatgggtacacggagcgcaagtgcataaacac
aagtgtgatgtggacagtgggattgcatggtga
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integrated database retrieval system
