KEGG   Papaver somniferum (opium poppy): 113297435
Entry
113297435         CDS       T05758                                 
Name
(RefSeq) sm-like protein LSM8 isoform X1
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03018  RNA degradation
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113297435
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113297435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113297435
   03041 Spliceosome [BR:psom03041]
    113297435
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113297435
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113297435
Spliceosome [BR:psom03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113297435
SSDB
Motif
Pfam: LSM RVT_2 DUF150_C
Other DBs
NCBI-GeneID: 113297435
NCBI-ProteinID: XP_026401689
LinkDB
Position
7:60333071..60335086
AA seq 98 aa
MSGGPGLESLVDQQISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISIVGEVDEELDSNLDMSKLRAHPLKPIIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcaggtggacctggacttgagtctcttgttgatcagcaaatctcggttataacaaat
gatgggcgaaatatagtgggagttctaaaaggttttgaccaggctaccaatatcattctg
gatgaatctcatgaaagggtttactctacaaaggaaggtgtccaacaacttgtattaggc
ttgtacatcataaggggtgacaacataagtattgttggggaagtagatgaagaactcgac
tccaatctagacatgtcaaaattaagagcacatcctcttaaaccaataattcactga

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