Papaver somniferum (opium poppy): 113297557
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Entry
113297557 CDS
T05758
Name
(RefSeq) pre-mRNA-splicing factor syf2-like
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113297557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113297557
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19-related factors
113297557
Complex C
113297557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
113297557
NCBI-ProteinID:
XP_026401848
LinkDB
All DBs
Position
7:complement(68748313..68751058)
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AA seq
302 aa
AA seq
DB search
MAEGSRVHPDCRNASNPYHECVEFCFLRIAEVKERLERSQSELKQAGSHTHQDKDLDDQG
ISQEEHADKDDDDHPAEENVEVDYASLSERQKKLFNLRLKMNEARKANQTAMVAEKKKIE
APQETRGISKQKWMEDRKKKIGKLLDSNGLDMTKAYMLDTQEAAEAKYKKWEKEPAPFGW
DVFNQKTLYNAYKKRTKNIDCNLEEYNKMKEADLEFYREASSLQYGKTPKISEDKIDKMV
KELNDRDGKRKEFSRRRKFHEEKDIDSINDRNEHFNKKIERALGKYTLEIKNNLERGTAL
PD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtagtagagttcatcctgattgtagaaacgcatcaaatccttatcacgaa
tgtgttgagttttgctttcttagaatcgctgaagtgaaggaacgattagaacgatcacaa
tcagagcttaaacaagctggtagccatacccatcaggacaaggatcttgatgaccaggga
atcagtcaggaagaacatgctgacaaggatgatgatgatcatcccgctgaggaaaatgtt
gaggtagattatgccagcctcagcgaaaggcagaaaaagttgttcaacctgaggctaaag
atgaatgaggcaagaaaagcaaaccagactgccatggtagctgagaagaagaaaatcgaa
gctcctcaggagacgaggggtatttctaaacaaaaatggatggaggataggaagaaaaaa
attggaaaactactagattctaatggcttggatatgacaaaggcatacatgcttgataca
caggaggcggcagaggcgaaatataaaaagtgggaaaaggaacctgctccttttggttgg
gatgttttcaaccagaaaacgttgtataatgcttataagaagcgtacgaaaaacatagac
tgcaacctagaagaatataataagatgaaagaagctgatctggagttctaccgtgaggct
tccagtcttcaatacgggaagacaccaaaaatctcggaggataaaattgacaagatggtg
aaggagctcaatgacagggatggcaagcgcaaagaatttagcaggaggaggaaattccat
gaagagaaagatattgattctatcaatgaccgtaatgagcatttcaacaagaaaattgag
agagccttgggtaaatacacgttggaaatcaagaataatcttgagcgaggaacggctctg
ccagactaa
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