Papaver somniferum (opium poppy): 113297656
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Entry
113297656 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113297656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113297656
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113297656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Smg4_UPF3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113297656
NCBI-ProteinID:
XP_026401986
LinkDB
All DBs
Position
7:75203811..75209137
Genome browser
AA seq
264 aa
AA seq
DB search
MRSSRSIYVGNLPLDIKESEIEDLFYKYGRIVDIELKIPPRPPGFCFVEFEDSRDAEDAI
RGRDGYNFDGCHLRVELAHGGRGHSSSFDRRGGYGSGGGARGGGAAAASRRSEYRVVVRG
LPASASWQDLKDHMRKAGDVCFAQVFRKGDGTMGLVDYTNYDDMKYAIRKLDDTEFKNPF
SKAYIRVKAYETSPSRGRSSSRSSSRSRSRSRSRSAGRKRSNSLEQEGCVPRSPSRCRSV
TPVKSKPRSKSRSASPDKVRALSP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagatcttctcgctcgatctacgtgggtaacctccctttggatataaaagaatcggaa
attgaggatctattttacaagtatggtcgtatagtggatattgagctgaagatcccacca
cgccctcctggtttctgttttgtggagtttgaggattcacgggatgccgaagatgcaatc
aggggccgtgatggctataactttgatggttgccacttaagggttgagcttgcccatggg
ggtagagggcactcatcttcatttgatcgtcgcggtggttatggtagtggtggtggtgct
cggggtggtggtgccgctgctgcttcacgtcgctctgaatatcgagtcgtggttcgtgga
ctacctgcttctgcttcgtggcaagatctaaaggatcacatgcgcaaagctggtgatgtc
tgcttcgcacaagtttttcgtaagggagatggtaccatgggtcttgtagattatacgaat
tatgatgacatgaaatatgctattcgtaaacttgacgatacagagttcaaaaatcccttt
tcaaaggcttatattcgtgtgaaggcatatgaaaccagtccatctagaggccgtagctca
agccgcagttccagtcgtagccggagccgcagtcgaagtagaagtgcggggagaaaaagg
agcaactcattggaacaagaaggatgtgtgcctagatctccatcaagatgtaggtctgta
actcctgtcaagtcgaagccaaggtcaaaatcaaggtcagcttcaccagacaaggtgcgc
gctcttagtccctga
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