Papaver somniferum (opium poppy): 113297858
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Entry
113297858 CDS
T05758
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113297858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113297858
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113297858
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113297858
NCBI-ProteinID:
XP_026402215
LinkDB
All DBs
Position
1:complement(116722990..116726613)
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AA seq
397 aa
AA seq
DB search
MENKLVVLGIPWDVDTDGLRDYMSKFGELEDVIVMKERSTGRSRGFGYVTFAEVEDAKNA
LESEHFLGNRILEVKVATPKEEMRAPSKKVTRIFVARIPQTVTEAIFRSYFETYGEITDI
YMPKDQGSKAHRGIGFITYETADSVDTLMSETHELEGSTIVVDRATPKDDDSTHMRQPPP
SRVPQGGYGAYNAYITAATRYAALGAPTMYDHPSLGYARGVAEPAVRGMGKKIFVGRLPQ
EASVEDLRHYFGRFGRIIDVYVPKDPKRTGHRGFGFVTFAEDGVAERVSRRTHEICGHQV
AIDSATPLDDAGGTSGGGGVGNLMMQNLEPYGGYIGPMRAYNNYGSLDFDDWGNYGGQTY
GGQSYGGLARAGVNIGGGGGGASSGRPSRMDWRFRPY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagcttgtggttcttggtatcccatgggatgttgatactgacggcttgaga
gactacatgagcaaatttggagagctagaagatgttatagtgatgaaggaacggtcaact
gggcgctctcgtggttttggttatgtaacttttgcagaggttgaggatgcgaagaatgcc
ctggaaagtgagcactttcttggtaacagaattctggaagtaaaagttgccacaccaaag
gaagaaatgagagcaccttctaagaaagtaacaaggatttttgtggccagaatcccacag
actgtaacggaagcaatattccgaagttattttgaaacctatggtgagataacagatata
tacatgcccaaggatcaaggctcaaaagctcatcgtggaattgggttcattacttatgaa
actgcagattctgtggacactttgatgtctgaaactcatgaattggaaggttcaacgata
gttgtggatcgagcaaccccaaaggatgacgactccactcacatgagacaaccaccacca
agcagagtaccacagggtggatatggggcatataatgcatatatcactgcagcaactaga
tacgctgcactgggtgctcctacaatgtatgatcatccaagcttaggatacgcaagaggg
gttgccgaaccagctgtgcggggaatgggcaaaaagatctttgttggtaggcttccacag
gaggcaagcgttgaagatcttcgccactattttggcagatttggtcgtatcatagatgtc
tatgtccccaaggacccaaaaagaactggtcatcggggctttggttttgtaacttttgcg
gaggatggtgtggcagagcgtgtttctcggaggactcatgaaatttgtggacaccaggtt
gcaatagattcagcaactccacttgatgatgccggtggtacaagtggaggagggggagta
gggaacctaatgatgcagaatctagagccttatggtggctatataggtccaatgcgtgct
tataacaactatgggagtctggattttgacgattgggggaattacggtggccagacatat
ggtgggcagagttatggtggtctagctcgggctggtgttaatattggtggcggcggtggt
ggtgctagcagtggcagaccttcgagaatggattggaggtttaggccatactaa
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