Papaver somniferum (opium poppy): 113297868
Help
Entry
113297868 CDS
T05758
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113297868
09124 Replication and repair
03420 Nucleotide excision repair
113297868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psom03051
]
113297868
03400 DNA repair and recombination proteins [BR:
psom03400
]
113297868
Proteasome [BR:
psom03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
113297868
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113297868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
113297868
NCBI-ProteinID:
XP_026402222
LinkDB
All DBs
Position
7:complement(92032036..92039132)
Genome browser
AA seq
371 aa
AA seq
DB search
MKLTVKTLKGSHFDIRVQPGDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLE
DNKVSEDGFLVVMLSKSKSSGSAGASSTQSAPSSTPAPISTPTPAPIASSPAPATAISGS
ESVAAEVLADSYGQAASNLVAGNTVEQTIQQLMDMGGGNWDRETVTLALRAAYNNPERAV
DYLYSGIPASAEVAVPVQESGGANPTTGTSLAGAAPLSGGPNASPLNMFPQEALNSGAAV
GDGSLDFLRNNQQFQALRQMVQSNPQILQPMLQELSKQNPQLLRLIQEHHAEFLQLINEP
VEGGEGGDLFEQPDQDMPHAISVTPAEQEAIDRLEAMGFDRALVIEAFLACDRNEELAAN
YLLENAGDFED
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttactgtcaagactttaaaaggtagtcatttcgatatcagggttcaacctggt
gatacgattatggctgtgaagaagaatattgaagatgttcagggaaaggataactatcca
tgtggtcaacagttactgattcataatggaaaggtcttgaaagacgaaaccactttggaa
gacaataaagtcagtgaggatggtttccttgttgtgatgcttagcaagagtaaatcctca
ggttcagctggagcctcatctactcagtccgcaccatcatctacacctgcaccaatatct
acgcctactcctgcacctatagcttcttccccggccccagcaactgccatttctggttct
gaaagcgtagcagctgaggttcttgctgattcctatggacaagctgcatccaatttggtt
gctggtaatactgttgagcaaacaattcagcaactaatggatatgggtggtggtaattgg
gatagggaaactgttactcttgcacttcgtgcagcctacaacaatccagagcgagctgtt
gactatttatactcgggtattcctgcatcagcggaggttgctgttccagtacaagaatca
ggtggtgcaaaccccaccactggaactagtctagcaggagctgcacctctttctggagga
cctaatgcttcccctcttaacatgtttccacaggaggctcttaattctggagctgctgtt
ggtgatggatcccttgatttcttaagaaacaaccaacagtttcaagcattgcgtcaaatg
gtgcaatcgaatccacaaattctacagccgatgcttcaggaactaagtaagcaaaatcca
caacttctgagactaattcaggagcatcacgccgagttccttcaactaataaatgaacct
gttgaagggggtgaaggaggagatttgtttgagcagcctgatcaagatatgcctcatgcc
atcagtgtcacaccagcagaacaggaggcaattgatcgacttgaagcaatgggatttgat
agagcgcttgtgattgaagcctttttagcttgtgatcgtaatgaggagttggcagctaac
tacttattggagaatgcaggagattttgaagattaa
DBGET
integrated database retrieval system