KEGG   Papaver somniferum (opium poppy): 113297888
Entry
113297888         CDS       T05758                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
psom  Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:psom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psom03009]
    113297888
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    113297888
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML EIF3I WDR55 NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st WDR54 Beta-prop_BBS7 Beta-prop_Nup120_160 PEP5_VPS11_N CILP_C Beta-prop_ELP1_2nd
Other DBs
NCBI-GeneID: 113297888
NCBI-ProteinID: XP_026402248
LinkDB
Position
1:complement(116877212..116880177)
AA seq 454 aa
MEFSKTMEVVMASSKLDAGISCFDIETGAEQLRLKSCASPPHGLISLSERFFVSSQVRES
SSSSSGSILHWSRDKPVADVKSFPAEPISPLVSNSDGTYIIGGGCSGNIYLWEVASGRLL
KKWNAHYRGVTCLVLSDDESLLISGAEDGCVRVWSLLMIFDDIGRTAATHLYEHNFSEHT
LKVTDIVTGHGGCNAIIISSSEDRTCKVWSLSKGKFLRTIDFPSAINAVALDPCEHIFYA
GGKDGKIYVVSLTGENTSASKYGMHIVGALSDNSNTAVTCLAFSKSGVLLVSGWEDGRIR
IWDTKSKQIVRMLQHSKGQVSNVIVVHRPLNSASQTSMATQSSASKRNASLLPPLDKYVT
STDDNDDFKTVTASQPPLSRVTDALYCSSDVMKSQIKELQQEGSTAASQLELDRLRVDCK
RSLQMSEQWKKMHGDLHQFCADELVDYGRNGCAK
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaattttccaaaacaatggaggtggtaatggcatcatcaaaactagatgcaggaata
agttgttttgatattgaaacaggagcagaacaacttcgtctcaaatcatgtgcttctcct
cctcatggtctcatcagcttatctgaacgcttctttgtctcctctcaagttcgcgaatcc
tcctcttcttcttctggttctatcctccactggtcccgggacaagcctgtagcagatgtt
aaaagctttcctgctgaaccaattagtcctcttgtttcgaattctgatggcacttatatc
attggcggtggttgctctggtaacatttacctctgggaggttgctagtggaagactactt
aagaagtggaatgctcattatagaggtgtaacttgtttggtattatctgatgacgaatct
cttttgatttccggggctgaggatggatgtgtccgtgtctggtctcttctcatgatattt
gatgatattggaaggacggccgccacacatctgtatgaacataacttttctgaacatact
ctaaaggtgaccgatattgttacaggccatgggggatgcaatgcaattattatttcttca
tctgaggaccgtacgtgtaaggtttggagcttatctaaagggaagttcttgagaacaata
gacttcccttcagcgattaatgcagtcgcactagacccctgtgaacacatattttacgct
ggtggtaaggatggcaagatatacgttgtgtcacttactggtgagaacacctctgcgagc
aagtatgggatgcatatagttggagcattatctgataacagcaatactgctgtcacttgc
ttagcatttagcaaaagtggagtcctattagtctctgggtgggaggatggcagaattcgg
atttgggacacaaaaagcaaacaaattgtccgtatgctgcaacactcaaaaggccaagtc
agcaatgttattgtcgtccatcggccactcaattcggcctctcagacatcaatggcaaca
caatcatcggcatctaaaaggaacgcatcattgctaccaccactggataaatatgtaacc
tcaacagatgacaatgatgactttaagactgttactgcatctcaacctcctctttctaga
gtcacagacgctttatactgcagttctgatgtgatgaaaagtcaaataaaagaactccag
caagagggttcgactgctgcttctcaactggaattggatagactaagggtagactgcaaa
agatctctgcagatgtccgagcaatggaagaagatgcacggtgacctgcatcagttctgc
gcagacgaattagtagattatgggcgaaatgggtgtgctaaataa

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