Papaver somniferum (opium poppy): 113297900
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Entry
113297900 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113297900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113297900
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113297900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
113297900
NCBI-ProteinID:
XP_026402264
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Position
7:95556123..95563006
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AA seq
849 aa
AA seq
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MFQQLFLLKECKPTAVRIFSSRQKATMYWWWITQMKKMDNRLEVIYNLKFSKMTHDRNYS
DLQMSGAEQQVGSPMQTSYRAKQERRENSTSQWDNQVIKPAGEQRNPSYNSQSIFLKKPD
GETPTKDVLGGDQRKRKGEKEGNIGNCSETPIEKSIGVYVGVQDGLMSSSQSGGHSGGDD
ELVDIWKEMSVTLECSKDASFTLGTAVEHNTLEEEGKECEHSFVLRDDLGYVCRICGVIE
KRIEQIFDFQWGKGRKITRGSCISQSRDAKNGKQVEGSQFTVQIPLDQNFGVADISVHPR
HRKQMKPHQLEGFNFLLRNLVSDHSPGGCILAHAPGSGKTFMIISFMQSFLAKYPDARPL
IVLPKGILGTWKKEFERWQVEKIPLYDLYASSKSDSRAQQLNVLKQWVEHKGILFLGYQQ
FASIVSNSTSSSTAEACHDILLKVPTLLILDEGHTPRNETTDVLYSLSQVQTPLKVVLSG
TLFQNHVKEVFNILNLVRPKFLKLDTSKAVVRRVMSRVQIAVRKRIKSRGADTMFYDLVE
EALQNDQDFRRKVTVIKDLREMTGKVLHYYKGDFLDELPGLVDLTVLLTLNPKQKHAVEE
IRKLDKFKRSSMGSAVYVHPQLKEYLESCTTGEKGHINEAKIDELLNKVEITDGVKAKFF
LNILALCESSGEKMLVFSQYLLPLKFLERLVVKIRGGSLGKEIFVISGDSSQEQREISMG
CFNHSKYAKVFFGSIKACGEGISLVGASRLVILDIHLNPSVTRQAIGRAFRPGQTKKVYV
YRLVAADSPEEEDHRTCFLKELISKMWFEWNEICGYHDFEMEEVNTKDLDDSFWDRPSLG
EDVMALYKR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcagctatttctgctgaaggaatgcaaaccaacagcagtcagaatattttcc
tcacgccagaaagcaacaatgtactggtggtggataactcagatgaagaaaatggacaac
agattggaagtaatttataaccttaagttctctaagatgacacatgatcgcaattacagt
gaccttcagatgtctggtgctgaacaacaagtaggatctccaatgcagacttcataccgt
gcaaaacaggagcgcagagagaattctacctctcagtgggataatcaagtgattaaacct
gctggagaacagaggaacccttcttacaactctcaatcgatctttttgaagaagccagat
ggtgaaaccccaacaaaagatgtacttggaggtgatcaaagaaagagaaaaggtgagaaa
gaagggaatataggtaattgtagtgaaacaccaattgagaaatcaataggtgtatacgtg
ggtgttcaagatggtctgatgagcagctcccagagtggtggtcatagcggtggagacgat
gaacttgtagatatatggaaggaaatgtcggtaacactagaatgttcaaaggatgcttct
ttcactctgggtaccgctgttgaacataatacactagaagaggagggaaaagaatgtgaa
cattcttttgttctcagggatgatctaggatatgtttgtaggatatgtggggtcatagaa
aaaagaattgaacaaatatttgacttccagtggggaaagggaagaaagatcactagaggt
agttgcatatctcagtcacgtgatgcaaagaatggcaaacaagtcgagggatcccagttt
actgttcagattccactggatcaaaattttggtgtggctgatatatccgtgcatccaagg
cacaggaagcaaatgaagcctcatcaacttgaaggtttcaacttcttgcttaggaattta
gtgagtgaccacagtccaggtggttgcattctggcacacgctccagggtctggaaagacc
tttatgattataagttttatgcaaagcttcctggccaaatatcctgatgccagaccactt
atagtgttgccgaaaggaatattgggtacttggaagaaggagtttgaaagatggcaggtt
gagaaaattcccctgtatgacttgtatgcttcttcaaaatccgatagtcgagcacaacaa
ttaaatgtcttgaaacaatgggtggagcacaaaggaatcttgtttctcgggtatcaacaa
tttgcaagcatcgtatctaacagtacaagcagcagcactgcagaagcctgccatgatata
ctccttaaggttcctactttacttattttggatgaaggccacacgcctagaaacgagacc
acagatgtgctttactccctttcacaggttcaaacccctctgaaggtagtattatctgga
accttatttcagaatcatgtgaaagaggttttcaacattttgaatcttgtgcggccaaag
tttctgaagttagatacatcaaaggctgttgtgaggagggtcatgagtagggtgcagatt
gctgtcaggaagcggattaagagtcgcggggcagacacaatgttctatgatttagttgaa
gaggccctgcaaaatgatcaagatttccgaaggaaagtcacggtgataaaagaccttcgt
gagatgacaggcaaggtgttacactactataaaggtgattttctggatgaacttccagga
cttgttgacttgactgtacttctcactcttaaccccaaacagaaacatgcagtagaagaa
ataagaaaattggataagttcaagagaagttccatggggagcgcagtatatgttcaccct
caattaaaggaatacttagagagttgcaccacaggggagaaaggacacattaatgaagca
aagattgatgagcttcttaacaaagtagaaatcactgatggtgtgaaagcaaaatttttc
ttgaatatattggcgctttgtgaatcttctggggagaagatgttagttttcagtcagtat
ctgctcccactgaagtttttagagaggctggtggtgaagattagaggtggaagcctgggg
aaggaaatatttgtcatctcaggcgactcaagccaggagcagagggaaatatctatggga
tgttttaaccattctaagtatgcaaaagtcttctttggttcaataaaggcatgcggggaa
ggaatatctctagtgggggcatctcgcttagtgattttagatattcatctcaatccgtca
gttacccgacaggcaattggtcgtgcattccgacctggtcaaacaaaaaaagtatatgtg
tataggttggtggcagcagactcacccgaagaggaagaccaccgtacatgctttctgaag
gagttaatttcaaagatgtggtttgagtggaacgagatatgtggttaccatgattttgag
atggaggaagtcaatacaaaggacttggatgattcattctgggatagaccttccttaggt
gaagatgtgatggctttgtacaaaaggtga
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