Papaver somniferum (opium poppy): 113297917
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Entry
113297917 CDS
T05758
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113297917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113297917
Spliceosome [BR:
psom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113297917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
113297917
NCBI-ProteinID:
XP_026402306
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Position
7:complement(97037890..97041776)
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AA seq
486 aa
AA seq
DB search
MAILADSFLADLDDLSDSEANVPHEDEGHESDMDEDSDGDIADIESLNYEDLDSVSKLQK
SQRYIDIMQKVEAALQKGSETEEQGFSSEDNPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLVPSAVIMVVSVTASTTVGKP
LPEDSLNKTIEACDRALALDIAKKEVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
TALAKMPACNVQLLGAKRKTLAGFSTATSQYRVGYLEHTEIFQTTPPALKMRACRVLAAK
STLAARVDSIRGDPTGKTGRNLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAA
KVAKKSKIKSYGSVSGTTSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEVGTF
SKIKRI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctatacttgctgattctttcttggcggatcttgacgatttatcagatagtgaagct
aacgttcctcacgaggatgaagggcacgaaagtgatatggatgaagatagtgatggtgac
attgctgacattgaatctttaaactatgaggatctggatagtgtctctaaattgcagaag
tcacaacgctacatcgacataatgcagaaagttgaagctgcactgcagaaggggtctgaa
actgaggagcaaggctttagttcagaagacaatcctgaatatcaacttatagtagactgc
aatgcactgtcggttgacattgaaaatgagatagttatcattcacaattttatcagggat
aagtatcggcttaaatttcctgagctcgagtctctggttcatcacccaattgattatgct
agagtggtaaagaagattggaaatgaagtagacttaaccctagttgatttggaagggctc
gtaccatcagctgtcattatggttgtatctgttacagcatccactactgtcggaaagcca
ctccctgaagattctctcaataagactattgaagcctgtgatcgagctcttgctcttgat
atagcaaaaaaggaagttcttgactttgtagagagtagaatgggatatattgcaccaaat
ctatctgctatcgttggaagtgctgttgctgcaaaacttatggggaccgctggtggtttg
acagcattagctaagatgccagcttgtaatgttcagcttcttggtgcaaagagaaagact
ctggcaggattttctactgcaacttcgcaatatcgtgtggggtatcttgagcacacagaa
attttccaaactacacctcctgctttgaaaatgcgcgcttgccgagttttggctgcaaaa
tcaacacttgcagcaagagttgattcaataagaggagatccaaccgggaagacgggaagg
aacttgagggaagagatccggaagaaaattgagaagtggcaagagccgcctccagcaaag
caaccaaaacctcttccagttcctgattccgagcctaaaaagaagaggggtggtcgtcgt
ttgcggaaaatgaaggagagatatgcagtaacagatatgaggaagctggccaacagaatg
cagtttgggatacccgaggagagctcgttaggggatggactcggtgaaggttatggtatg
cttggtcaggccggaaatggcaagttgcgtgtatcagttggccaaagcaaacttgctgca
aaagttgctaagaagtccaagattaaaagctacggaagcgttagtggtactacctcaggc
ctaacctcaagtctagcattcacacctgtacaaggaattgaactctcaaatcctcaggcc
catgcaaatcagctaggtagtggaactcaaagcacctacttctcagaggtgggcaccttt
tcaaaaatcaagaggatttga
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