Papaver somniferum (opium poppy): 113297965
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Entry
113297965 CDS
T05758
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03410
Base excision repair
psom03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113297965
03450 Non-homologous end-joining
113297965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113297965
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113297965
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113297965
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
113297965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
BRCT
HHH_5
Cdd1
DUF6305
Motif
Other DBs
NCBI-GeneID:
113297965
NCBI-ProteinID:
XP_026402374
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All DBs
Position
7:complement(100227099..100231306)
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AA seq
533 aa
AA seq
DB search
MAPKRATTPKKRLTSAVDQESVGDGGGGGGLFHGLIFFLVDIGVQPRRLQIWKQKLVQME
GTVEDQFSKRVTHILAMSSKALLEKVCKESLMPFKGSVLLYQWLEESLKLGEKVSEELYS
LKTEAEGDNESPKSIDRVRNKSEGSQSDDNESPRDKKARHSPEHASVSPAVSNESHGVKT
RDGTNNSGGDSNKDVSLPYAPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEK
LPFKIESVDQVKHLPTIGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTINLFGEVWGIGP
ATALKLYEKGHRTLNDLKNEDSLTHSQRVGLEYFEDIKKRIPRKEVQDMEHLLQKAGEEV
LPGVSVVCGGSFRRGKATCGDMDIVITHPDGTSHKGFLAKYVKHLKDLNFLREDLIFSTH
SLEGTDSGVDTYFGLCTYPGRETRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRIIAES
KGYRLDDTGLFLATHGSDGKKGARATKSLSLNTEKEVFDFLGFPWLEPHERNL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagagagcaacaaccccaaagaagaggctaacttctgcagtggaccaagaa
tctgttggtgatggcggtggtggtggtggtctgttccatggtttgatctttttcttagtc
gacattggagttcaacctcgaagattacagatttggaagcaaaagttggtgcaaatggaa
gggacagttgaggatcagttttcaaagagggtcactcatattttagctatgagctcgaaa
gcacttcttgagaaagtgtgtaaagaaagcttgatgccctttaaaggaagtgtgcttctt
taccagtggttggaggaaagcttgaaattaggagaaaaggtctctgaagagttgtacagt
ctaaaaactgaagcagaaggggataatgaatcacctaaatctattgaccgtgtcagaaat
aagtctgaaggtagccaatctgatgataatgaatcaccacgtgataaaaaggccagacat
tcgcctgagcatgctagtgtttcaccagcagttagtaatgagagtcatggagtgaaaaca
agagatgggacaaataattctggtggagactccaataaggatgtgtcactgccatatgct
cctcctgatttaaacaggaacatcactgagatattcggaaagcttatcaacatctataga
gcattaggagaggatcgtaggtcatttagctattacaaggctattcctgtgattgaaaag
ttgccatttaaaattgaaagtgtggaccaggtcaaacacttgcctacaattgggaaatca
atgcaggatcatattcatgagattgtgactactggaaagctgtcgaagctggagcatttt
gagaccgatgaaaaggtgcggacaatcaacctatttggggaagtttggggtattggtcca
gctacagctcttaaactgtatgaaaaaggccaccgcacgttgaatgatctgaagaatgag
gactcactgacacattcacagagggtagggttggagtatttcgaagatatcaagaaaagg
attcctcgcaaggaggttcaagatatggagcatctacttcagaaagctggtgaagaagtt
ttacctggggtaagcgttgtctgcggaggatcatttagacgcggtaaagctacttgtggg
gatatggacattgtaattacacaccctgatgggacaagtcataaaggttttcttgctaaa
tatgtaaagcatctgaaggatctgaacttcttaagagaggatttgatcttcagcacccac
agcttagagggtactgattcaggggtcgacacatattttggtctttgtacatatcctggt
cgggagacgcggcacaggatagacttgaaggtttacccgagggatatatatgcatttgga
ctaatagcgtggacgggaaatgatgtcttaaacaggaggttgaggattattgctgaatcc
aagggataccgactcgacgatacagggctgtttttggctactcatggttcagatgggaaa
aagggtgctcgagcaactaaaagtttgagtctcaatacagaaaaggaagtgttcgacttc
ctgggctttccttggcttgaaccacatgagaggaatttgtga
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