Papaver somniferum (opium poppy): 113298056
Help
Entry
113298056 CDS
T05758
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113298056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113298056
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113298056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2987
Motif
Other DBs
NCBI-GeneID:
113298056
NCBI-ProteinID:
XP_026402496
LinkDB
All DBs
Position
7:106340624..106347846
Genome browser
AA seq
942 aa
AA seq
DB search
MDETLQDQNKLPELKLDSKQAQGFISFFKNLPKDPRAIRFFDRRDYYTAHGENATFIAKT
YYYTTTALRQLGSGSDGISSVSVNRNMFETIVRDLLLERTDHTLELYEGSGSNWRLSKSG
TPGNLGSFEDVLFANNEMQDSPAIVALYPNFRENECTIGLSYVDLSKRVLGLAEFVDDSQ
FTNVESALVALGCKECLFPLESGKSIEIKSLHDVLSRCGVLLSERKKTEFKSRDLAQDLS
RLIKGSIEPVCDLLSGMDYASGSLGSLLSYAELLADESNYGNFTIQKYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLNRWLKQPLLDVTEINSRLDLVQAF
VEDTALRQDLRQHLRRISDVERLMHNLEKKRAGLQHIIKLYQSSIRLPYIKSALERYDGQ
FSPLIKEKYLDQLECYIDDNHLNKFVALVETAVDLEQLENGEYMISPGYDQKLCELKSER
DAVEQKIHNLHKETSNDLDLPLDKALKLDKGTQFGHVFRITKKEEPKVRKKLATQFIILE
TRKDGVKFTNSKLKKLGDQYQKVLEEYTSCQKEIVARVVRTAATFSEVFDTLAGILSELD
VLLSFADLATSCPTPYARPSITAADEGDIVLEGSRHPCVEAQDGVNFIPNDCNLIRGKSW
FQIITGPNMGGKSTFIRQVGVNVLMAQVGCFVPCDKAHISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDRSLIIIDELGRGTSTYDGFGLAWAICEHLVAVTKAPTLFATH
FHELTALAHENAYSELSKKPNQGVANYHVSAHIDSESHKLTMLYKVEQGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPDLIISNHSKEEVEPKRKRECDSEDMSRGAARARRF
LQEFTALPFEQMESKQAFQHISKLRSDLEKDACDSSWLQQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaccttgcaggatcagaataagctcccggaactaaaattagattctaaacaa
gctcaagggtttatctcatttttcaaaaacctacccaaagatcctagagctattaggttt
tttgatcgtcgggattattatactgcacatggtgaaaatgcaacttttatagcaaagaca
tactactacactactactgctctgcgacaacttggtagtggctctgatggtatttccagt
gtgagcgtcaacaggaatatgtttgaaaccattgtccgtgatcttctattggaaaggaca
gaccatacactagagctctatgagggtagtggttcaaattggcggttatcaaaaagtgga
acccccggaaacctgggcagttttgaagatgttttatttgccaacaatgagatgcaagat
tctcctgcgatagttgcgttgtatccaaactttcgcgagaatgaatgcactatagggttg
agctatgttgacctgtctaagagagtacttgggttggcagaatttgtggacgacagccag
ttcacaaatgtcgaatcagctctagttgctcttggatgtaaagaatgcctctttccactg
gagagtggaaaatctattgaaattaaaagcttgcatgatgtgttgtctagatgtggtgtc
cttcttagtgagagaaagaaaactgaatttaagtcgagggatttggcgcaggaccttagt
cgtctcatcaagggctcaattgaacctgtttgtgatttactctctggtatggactatgca
tctgggtctcttggatcattgttgtcctatgcagaattacttgcagatgagagtaattat
ggtaactttactatccaaaagtacaatcttgacagctacatgaggttagattctgctgct
atgagagcattaaatgttttggagagcaaaacagatgcaaacaagaatttcagcttgttc
ggtttaatgaatagaacatgtactgctggtatgggaaaaaggttgttaaataggtggttg
aaacaacctttactagatgtaactgaaatcaactccaggttggatttggtccaggcgttt
gtcgaagatactgctcttcgccaagatctgagacagcatttgagaaggatttcagatgtt
gagcggctaatgcataaccttgagaaaaaaagagctggtttgcagcacattataaagctt
tatcagtcaagcatcagacttccgtatattaaaagtgctctggaacgatatgatggccaa
ttttcaccactgataaaagagaagtatcttgatcaacttgagtgttatattgatgataat
cacttgaataagtttgttgctcttgttgaaaccgctgttgatcttgagcaacttgagaat
ggagagtacatgatatcacctggttatgatcaaaagctatgtgaactaaaatctgaacgg
gatgcagtagagcagaagatacataatttacacaaagaaacttctaatgatcttgatctt
cctctagataaggctttgaagttggataaagggacacagtttggacatgttttcaggatt
acaaagaaggaagagcctaaagttaggaagaagctagcaacacagtttataatccttgaa
actcgaaaggatggggtaaagtttacaaactcaaagcttaaaaagttaggggatcagtat
caaaaggtactagaagagtatacaagctgtcaaaaagagatcgttgctcgagtggtccga
actgcagcaacgttttctgaggtttttgatacattagctgggattctttctgaactagat
gttttgcttagctttgctgaccttgccactagttgtccaactccatacgcaagaccaagc
ataactgctgcggatgaaggagatattgtactagaagggagtagacacccttgtgttgag
gctcaggatggagtaaattttattccaaatgattgtaatctgataaggggtaaaagctgg
tttcaaatcattacgggccctaacatgggtggaaaatctacatttattcggcaggttggt
gtgaatgttttgatggcacaagttggctgttttgttccttgtgacaaagcacacattagt
gttcgtgactgcatttttgctcgtgttggtgctggtgactgccagcttcgtggagtctcc
actttcatgcaagaaatgctagaaactgcttcgatattgaaaggagcaacagataggtcg
cttataattattgacgagttggggcgtgggacatcaacttacgatggatttggtttagct
tgggcaatatgtgagcaccttgttgcagtgacaaaagcaccaactctatttgcaactcac
tttcatgaactgactgcgttagctcatgaaaatgcctacagtgaactttctaaaaagccc
aaccagggcgtggcaaattaccatgttagtgcgcacattgattcggaaagtcacaagctg
accatgctttataaggttgaacaaggagcttgcgatcaaagttttggtattcatgtagca
gagtttgcaaatttccctgaaagtgttgttgcccttgctagagaaaaggctgcagagttg
gaagatttttcaccagatttgatcatttcaaaccattcaaaagaagaggttgaacctaaa
cgaaagcgtgaatgtgattctgaggacatgtctagaggagctgctagggctcgtcgattc
ttgcaggaatttactgctctgccatttgagcaaatggagtcgaagcaggcctttcagcat
atcagcaaattgagaagcgacttagaaaaggatgcatgtgactccagttggctccagcaa
ttcttctag
DBGET
integrated database retrieval system
