Papaver somniferum (opium poppy): 113298082
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Entry
113298082 CDS
T05758
Name
(RefSeq) alanine--tRNA ligase-like isoform X1
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113298082
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psom01007
]
113298082
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psom03016
]
113298082
Enzymes [BR:
psom01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
113298082
Amino acid related enzymes [BR:
psom01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
113298082
Transfer RNA biogenesis [BR:
psom03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
113298082
Prokaryotic type
113298082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
113298082
NCBI-ProteinID:
XP_026402527
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All DBs
Position
7:108621008..108630695
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AA seq
725 aa
AA seq
DB search
MPGIEPTTTDWPANRVRETFISFFQQKDHTNWPSSPVVPVNDPTLLFANAGMNQFKPIFL
GTADPRTDLGKLKRACDTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKTQA
ISWAWELLTQVYKLPADRIYATYFGGDEKLGLETDNEARDIWLKFLPPARVLPFGCKDNF
WEMGDTGPCGPCLEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKPLPS
KHVDTGMGFERLTSILQNKMSNYDTDVFMPIFYAIQQATGARPYSGKVGADDVDKIDMAY
RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGSEVLKGQEGFFSGLVRVVVE
LMGDVFPELRHHEVNIRNTIAEEETSFGRTLLKGIEKFKKAAQDLEGKVLSGQDAFLLWD
TYGFPLDLTQLMAEERGLLVDAKGFEDAMEEARNRSRSAQTKQVGGAIVMDADATSELHK
RGVSPTNDNYKFIWNKNHQSVVKAIYNGAEYMTSASVGDEVGIIMETTSFYAEQGGQIFD
TGSIVCSSRSFQVCNVQVFGGFVIHIGSFTGETGKISVGDKVTCKVNYNRRALIAPNHTC
THMLNYALKEVLGPHVDQKGSIVLPEKLRFDFSHGKPIPPNDLRKIESTVNKQIDDEMDV
YATEETLADAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPDNKEWLTISTEFCGGT
HISNT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaatcgagccgacgactacagattggcctgctaacagagtgagagagactttt
attagtttcttccaacaaaaagatcacacgaattggccgtctagtcctgttgttcctgtc
aatgatcctactcttctctttgctaatgctggcatgaaccagttcaagccaattttccta
ggaactgcggatcctagaactgacttgggtaagctcaagcgtgcttgtgatactcaaaag
tgcattcgtgctggtggcaagcataatgatctggatgatgttgggaaagatacctaccat
catacattttttgagatgcttggtaactggtcctttggagattacttcaaaactcaagct
atttcatgggcatgggagcttctcacgcaggtgtataagctacccgctgaccgtatatat
gccacgtattttggtggtgacgagaaattgggccttgaaactgataatgaagcaagagat
atatggctgaaatttttgccacctgctcgcgttttgccctttgggtgcaaggataacttc
tgggagatgggcgatactggtccttgcggaccttgcttagaaatccattttgatagaatt
ggcaaccgagatgctgcttcattggtcaacaatgacgatccaacatgcattgagatatgg
aatcttgtatttattcagttcaacagggaagcagatggctctctgaaacctctcccttcg
aagcatgtagacactgggatgggctttgagcggttgacttcgattcttcaaaacaaaatg
agcaactatgacacggatgtgttcatgcccattttttatgcaatccaacaagccaccgga
gctcgaccatactctggaaaagttggagcagatgatgtggacaaaattgacatggcttac
agggttgtggctgaccatattagaactctttcttttgcgattgcagatggatctcgtcca
ggcaatgagggtcgtgaatatgtcctgcgtcgcattcttagacgagcagtgcgctatgga
agtgaagtacttaaaggtcaagaaggtttcttcagtggacttgtaagagttgtggtggaa
ctgatgggggatgtctttccagaattgaggcatcatgaagtgaatattagaaacactatc
gcagaagaggaaacaagttttggaaggacattacttaagggtattgagaagtttaagaag
gctgctcaagatctcgaggggaaagtattaagtggacaggatgcgtttctcttatgggat
acatatgggtttcctctggatctaactcagctgatggcagaagaaagaggcctgctagtt
gatgcaaagggtttcgaggatgcaatggaggaagcaagaaatagatccaggagtgcccag
actaagcaagttggtggtgctattgtcatggatgctgatgccacttcggaattgcacaag
aggggagtctctccaacaaatgataactacaagtttatctggaataagaaccaccagagt
gttgtaaaagctatatacaatggcgcagaatatatgaccagtgctagtgttggtgatgaa
gtcggtattattatggaaacaacaagcttctatgctgaacaaggtggtcagatatttgac
accgggtccattgtgtgctcctctaggtcatttcaagtttgtaatgttcaagtttttggt
gggtttgttattcatattggttctttcactggagagactggcaaaatttcagtgggtgat
aaagtgacctgtaaagttaactataacaggcgtgctcttattgccccaaaccacacttgt
acccacatgcttaattatgctctaaaggaagttcttggtcctcatgttgaccagaagggg
tctattgttcttccagaaaagttgcgttttgatttctcccatggcaagcccattcctcct
aatgatttgaggaaaattgagtcaactgtgaacaaacaaatcgatgatgaaatggatgta
tacgccacggaggaaactcttgctgatgccaagcgtatcaatggtttacgagctgttttt
ggagaagtgtaccctgacccagttagagttgtggcaattggtaggaaggtagaggatctc
cttgctgatcctgataataaagaatggttaacaatctcaacagaattttgtggaggaact
catatctcaaatacgtga
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