Papaver somniferum (opium poppy): 113298150
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Entry
113298150 CDS
T05758
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
psom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113298150
09124 Replication and repair
03420 Nucleotide excision repair
113298150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113298150
03400 DNA repair and recombination proteins [BR:
psom03400
]
113298150
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113298150
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113298150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
113298150
NCBI-ProteinID:
XP_026402623
LinkDB
All DBs
Position
7:complement(112266845..112269436)
Genome browser
AA seq
327 aa
AA seq
DB search
MDSGISYQRFPKIKIRSMRDDYMKFELRDTDPSMANALRRIMISEVPTIAIDLVEIEVNS
TVLNDEFIAHRLGLIPLVSDRAMEMRFSRDCDACDGDGQCTYCSVEFQLSVRCDEDQTVD
VTSADLISSDLMVVPVDVALAAARSEGFDSAENKGIIIVKLRRGQELRLRAIARKGIGKD
HAKWSPAATVTYMYEPDIHINEDMMESLTLEEKQDWIESSPTKVFDIDPNTQQVKVYDAE
AYTYDDEVIKKAEAMGKPGLVEITAREDSFIFTVESTGAVKASQIVINAIEVLKQKLDAV
RLSEDTVEADDQFGELGAHMRGGWSCL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggattctggaatctcataccaaagatttccaaaaatcaaaatccgaagcatgagagat
gactacatgaaatttgagctacgggacaccgatccaagcatggcgaacgctctccgccgt
atcatgatctccgaagtcccaacaatagcaatcgacctagttgaaatcgaagttaactca
actgttttgaacgacgagtttatagctcatcgactgggtcttattccactcgtcagcgac
cgtgccatggaaatgagattctctcgtgattgtgatgcatgtgatggtgatggtcaatgt
acgtattgttctgtcgagtttcagttatctgtgaggtgtgatgaagatcagacagtagat
gttaccagtgctgatttaattagttctgatcttatggtcgttcctgttgatgttgcgctc
gccgctgcaaggtcggaggggtttgattcggctgagaataagggaattataattgtgaag
ctacgacgagggcaagagttgagattgagagccatagctcgaaaagggattgggaaagac
catgctaaatggtcacctgctgctactgtcacttacatgtatgaaccagatattcatatc
aatgaggatatgatggagagcttaactcttgaagagaaacaagactggattgaaagtagc
cctactaaagtttttgatatcgatcctaatacccaacaggtcaaagtgtatgacgctgaa
gcgtacacatatgatgatgaggtgatcaaaaaggcagaagctatgggaaagcccgggctt
gtggaaattacagcgagagaagatagctttatttttacggttgaatctacaggtgctgtg
aaagcttctcaaattgtaatcaatgcaattgaggtccttaagcagaagcttgacgctgtt
cgtctctccgaagacaccgtagaagctgatgatcaattcggggaactgggagcacacatg
cggggagggtggagttgtctatag
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