Papaver somniferum (opium poppy): 113298307
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Entry
113298307 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 19-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113298307
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113298307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
113298307
NCBI-ProteinID:
XP_026402794
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Position
7:122533158..122540979
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AA seq
727 aa
AA seq
DB search
MKRDFEEISDDEWEKHSSFKPRFPKKESSSLPLIESFSYQSKKIEISEGSSDDLLEITND
SLEDDDADVAEVRPQTNRARRFVVDEDSDEDFVVEEDTGPIFLDDDDEEEVEEVDVVGKA
LQKCSKISAVLKKELYGSSMSACDRYSEVETSSVRIVTQDDINAACATEESDFQPILKPY
QLVGVNFLLLLHKKNIAGAILADEMGLGKTIQAITYLTMLKYLDNDPGPHLIVCPASLLE
NWERELKKWCPSFTVLQYHGAGRAMYSKELNSLAKAGLPPPFNVLLVCYSLFERHSAQQK
DDRKVLKRWHWSCVLMDEAHALKDKSSYRWKNLMGVAQNAKERLMLTGTPLQNDLHELWS
LLEFMMPDLFATGDVDLKKLLNSEDKELIARIKSILGPFILRRMKSDVMQQLVPKIQQVR
HVSMERMQEDAYKEAIEEYRASSLARLEKSSASTPKSITEFIPRRQISNYFVELRKIANH
PLLVRRIYNDEDVVYHARKLYSKGAFGFECTLERVIEELKSYNDFSIHQLLESYFGSESK
GALEDNHVFLSAKCQALADLLPSLKRDGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDG
STQVTERQNIVDAFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQMDRQAEDR
CHRIGQTKPVTVIRLVTKGTVDENIYEIAKRKLVLDAAVLESDIEVDDETDMPEKTMGEI
LSALLLG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgattttgaagaaatttccgacgatgagtgggagaaacactcatcgttcaaa
ccgagattcccgaagaaagaatcttcatctctgccattgattgaatctttttcttaccag
tctaagaaaatcgaaatctcggaaggaagtagtgatgatttattggaaattactaacgac
agtttggaggatgatgatgcagatgtagcagaagttcgacctcaaactaatagagctcga
agatttgttgttgatgaagatagtgacgaagattttgttgttgaagaagatactggaccg
attttcttagatgatgatgacgaggaggaagtagaagaggttgatgttgttggcaaagct
ttacagaaatgttccaaaatatcagcagttttaaaaaaagagttatatggttcatcaatg
tcagcctgtgatagatattctgaggttgaaacgtcttctgtgaggattgttacacaggat
gatattaatgccgcttgtgcaactgaagaatcagattttcaacccatccttaaaccttac
caactagttggtgtcaattttcttcttctgttgcataagaagaatattgctggagccatt
ttggcagatgagatgggtcttggtaagaccattcaggctatcacatacttaactatgctg
aaatacttggacaatgatcctggaccccatttaattgtctgccctgcttctctcttggag
aactgggaaagagagttaaaaaagtggtgcccttcatttactgtgttacagtatcacggg
gcagggcgagcgatgtattcgaaggagttgaactctttagctaaggctgggttgccacct
ccttttaatgttcttttagtttgctactcactctttgagcgtcacagtgcacagcagaaa
gatgaccgcaaggtactgaagcgctggcactggagctgtgtgctaatggatgaagctcat
gctttaaaggataaaagcagctatagatggaaaaacctaatgggtgtagcacaaaatgca
aaagagcgtcttatgctgacagggacacctctccaaaatgatttgcatgaactgtggtca
ttgttggagttcatgatgccggacctctttgcaactggagatgtagacctgaaaaagctt
ttgaattccgaagataaggagttgattgctcgtataaaatccatcctgggaccgtttatt
ttgagacgcatgaaatctgatgtaatgcagcaactggtcccgaagattcaacaggttcga
catgtgtctatggaaaggatgcaagaggatgcttataaagaagcaattgaagagtatcgt
gcatcctctcttgctcggttggagaagtcgtcagcgtctactcccaagagtataactgaa
tttattccgcgacgccaaatatccaactattttgttgaactccgtaagatagctaatcat
cctttactggtgagacgtatttacaacgatgaggatgtcgtttatcatgcaagaaagctg
tactcaaaaggtgcatttggctttgaatgtaccttggaaagggttattgaagaacttaag
agttataacgatttctctattcatcagcttctagagtcatatttcggctccgaatctaaa
ggggctcttgaagataatcatgttttcctttctgcaaaatgtcaggcgttagctgatctt
ctcccttcattaaaaagagatgggcatagagttttgatttttagccaatggacctcaatg
cttgatattttagagtggactttggatgtaattggtgttacatatcggcgccttgatgga
agtactcaggtcaccgaaaggcaaaatatagtcgatgcgttcaataatgacacatcgata
tttgcttgtttgctatctacacgggctggagggcaaggcttgaacttaacaggagctgac
actgtagttatacatgacatggatttcaacccacagatggaccgacaagccgaagatcgc
tgccatcgcattgggcaaacaaaacctgttaccgttattaggcttgtgacaaagggaaca
gtagatgagaacatatatgagattgcaaagaggaaactggtgcttgatgctgcagtgctc
gagtctgacattgaagtggatgatgaaactgatatgcctgagaagactatgggagagata
ttatccgcactgttgctgggctaa
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