Papaver somniferum (opium poppy): 113298329
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Entry
113298329 CDS
T05758
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
113298329
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psom04040
]
113298329
Ion channels [BR:
psom04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113298329
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
113298329
NCBI-ProteinID:
XP_026402824
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Position
7:complement(123888755..123900021)
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AA seq
773 aa
AA seq
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MSGQHNAERDDKPMLWDTQSTSYTSRDVELPEFTVRTRSASMSRTPYSVDSFVNENHPVF
HTGPLGGGRRAPPIVHMSGPLNPYQKPDSVFLPMKNLTGPTTPNILALDYSSFKYTDEKD
SPVHSHSTTNEHLMKSGQLGMCNDPYCTTCPTYKKAAQRGNSKPHSDLRFQRFAQRDIKG
WARRFYNFLYSYIPGIMNPHAKVVQQWNKFFVISCLVAIFVDPLFFLLLSVREEFKCIVL
DWRMAITIAVVRSVTDLIYAMHMILQFRLAYVAPESRVVGAGDLVDQPKKIALNYVYGYF
FIDLFVVLPLPQIMILVVLPRYVGSSAANYAKNLLRATVLLQYIPRIFRCLPLLAGRSPS
GFIFETAWANFVINLLMFVLAGHVVGSCWYLFGLQRVNQCLRDACVGFENDDCKKFIDCG
NGDNISSFKKYPSWESWHKDINATDCLDKDSERFNYGIYGQAVRITTVRSNIVRYVYSLF
WGFQQISTLAGNLVPSDFVWEVLFTMAIIGLGLFLFALLIGNMQNFLIALGRRRLDMQLR
RRDVEQWMNHRRLPEGVKRRVRQSERFSWAATQGINEEVLLGNLSEDLQIDVRRHLFKFV
KKVRIFALMDDPIFDAICEKLKQKIYVAESRILYYGGPVDKLVFIVRGKLESVGADGNKA
ELSEGNVFGEELLALCLEQASVNRDGKKMKTPGHRVISNRMVTCLTNVEAFSLKVDDLEE
VTAFYAAFLRKPIVQAAIRYESPFWRGLAATRIQVAWRYRKKRLSRANKSISQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcaacacaatgccgagagagatgacaaacccatgctatgggatactcaatct
acgtcatacacatctagggatgtcgaattgccagagttcaccgtcaggacccgaagtgca
tcaatgtccaggacaccttattcagttgattcatttgttaatgaaaaccaccctgtcttt
catactggtcctttgggaggtggaagaagagctcctccaattgtacatatgagtggtcct
cttaacccttatcagaagcccgatagtgttttcttgccaatgaaaaacttgactggcccc
acgacacccaacatcttggcattagactattcttcattcaaatacacagatgaaaaagat
tctcccgttcacagtcattccaccacaaatgaacatttaatgaagtctgggcagttaggg
atgtgtaatgatccttactgcacaacatgcccaacttataagaaagctgcacagcgggga
aactcaaagcctcattccgacctaaggttccagcgttttgctcagagagatatcaaaggc
tgggcaaggagattctataactttctttattcatatattcctggcatcatgaatcctcat
gctaaagttgttcaacagtggaacaagttttttgtcatatcttgcttggtggcaattttt
gtagatccgttgtttttcttgttgctgtcagtgcgagaggagtttaaatgtatagttctt
gattggcgtatggcaataacaattgcagttgtgaggagcgtaactgacttaatttatgca
atgcacatgattcttcagtttaggctggcttatgttgctccggagtctagagttgtgggt
gctggagatttggtggatcagccaaagaaaattgctctcaattacgtttatggctacttc
tttattgatttatttgttgtgttacctcttcctcagatcatgatcttggttgttttacca
cgatatgtaggatcatctgctgcaaattatgcaaaaaatcttttacgagcgacagttctt
ctccagtatatacccaggattttcaggtgtttgccgttacttgctggtcgctctccaagc
ggcttcatatttgagactgcatgggccaactttgttattaaccttctcatgtttgtacta
gctgggcatgttgttggatcgtgttggtaccttttcggcttacagagggtaaatcagtgt
cttcgagatgcttgtgttggttttgaaaatgacgattgcaaaaagttcatagattgtgga
aatggagataacataagctcctttaagaaatatccaagctgggaaagctggcataaagac
ataaatgctactgactgccttgacaaagatagtgaacgttttaattatgggatctatggg
caagctgttagaatcactaccgttcgtagtaacattgttagatatgtttactccttgttc
tggggtttccagcaaatcagcactctggcgggaaatcttgttcctagtgactttgtatgg
gaagttctcttcactatggccatcattggacttggcttgtttctttttgcactgctgatt
ggaaatatgcagaattttctcatagcgcttggtcgaaggagattagatatgcaacttagg
cgccgtgatgttgagcaatggatgaatcaccgcagactgcctgaaggggtaaaaaggcga
gtcaggcaatcagaacgatttagctgggctgcaactcaaggtataaatgaagaagttctg
ctggggaatctgtcagaggacctacaaattgatgtacgccgtcatcttttcaagtttgtc
aagaaagtccggatcttcgctttaatggatgacccaatctttgatgccatctgtgaaaag
ttaaaacagaagatatatgtagcagaaagcagaattctttactatggaggtccagttgat
aagttggtttttattgtaagggggaaactggagagtgttggagcagatgggaataaagcc
gaactgtcagaagggaatgtctttggtgaagagcttcttgcattgtgtcttgagcaagct
tcagttaacagagatggcaagaaaatgaagaccccagggcaccgggtaatttccaacagg
atggttacctgcttaactaatgttgaagccttttctctcaaggttgatgatctcgaggaa
gtcacggccttttatgcagcattcctgcggaagccaattgttcaagcagctataaggtat
gaatcacccttttggagaggacttgcagcaacacgcatccaagtagcatggagataccga
aagaagcgtctgagccgtgccaacaaatctatatcacagtga
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