Papaver somniferum (opium poppy): 113298642
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Entry
113298642 CDS
T05758
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113298642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113298642
03009 Ribosome biogenesis [BR:
psom03009
]
113298642
04131 Membrane trafficking [BR:
psom04131
]
113298642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113298642
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113298642
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113298642
Membrane trafficking [BR:
psom04131
]
SNARE
SNARE associated proteins
Others
113298642
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113298642
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113298642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
ATPase_2
AAA_18
IstB_IS21
ABC_tran
Vps4_C
AAA_7
Viral_helicase1
NB-ARC
AAA_lid_PRS2_C
AAA_24
TsaE
NACHT
Zeta_toxin
DUF815
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
113298642
NCBI-ProteinID:
XP_026403219
LinkDB
All DBs
Position
7:complement(144334130..144339624)
Genome browser
AA seq
811 aa
AA seq
DB search
MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSMNPETMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGSLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVSW
QDIGGLDNVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRFQI
FKACLRKSPIAKDVDLSALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRSEN
PEAMEEDVDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAD
ASGAATGTTTSGAADPFAASAGADDEDDLYS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaagctgaatcttcagactcgaaaggaacaaagagagattttagtacagct
atattggaacgtaagaaagctgcaaatcgtcttgttgtcgatgaagcgattaacgatgat
aactctgttgtgtctatgaaccctgagaccatggaaaagttacagctcttccgtggtgat
accatccttatcaagggaaagaaaaggaaggacaccatctgcattgctcttgctgatgac
acatgtgatgagccaaagatcaggatgaataaagttgtaaggtcaaacttgagggtcaga
cttggtgatgttgtttctgtgcaccaatgccctgatgtcaaatatgggaagcgtgttcac
attcttcctgttgatgataccattgaaggtgtcactgggagtttgtttgatgcttatctt
aaaccttacttcttggaagcttatcgtccagtaaggaaaggcgatctgtttcttgtaaga
ggtggaatgaggagtgtagagtttaaagtcatcgagactgacccatcagagtactgtgtt
gttgccccagatactgaaatcttttgtgagggagagcctgttagaagggaggatgaagat
aggttggatgaagtaggttatgatgatgttggtggagtccgaaagcagatggctcagatc
cgtgagttggtggaattgcctcttagacatccacagctctttaaatcaattggtgtgaag
ccaccaaaaggaattttactttatggacctccaggttccgggaagacactgattgcccgt
gctgttgccaatgaaactggtgcctttttcttctgcattaacgggccagaaattatgtct
aaattagcaggagagagtgaaagcaatcttcgtaaggcattcgaggaagctgagaagaat
gcaccatctattatttttattgatgagatcgactccattgctcctaaaagagagaagaca
aatggtgaagttgagaggagaattgtttcccagctcttgactcttatggatggtctgaaa
tctcgtgcacatgttattgttatgggggccacaaacagaccaaacagcattgacccagct
cttaggaggtttggtaggtttgacagggaaattgacattggtgttccagatgagattgga
cgtctcgaggtccttcgtatccatactaagaacatgaagctctcggaagatgttgatttg
gaaaggatttcaaaagatactcatggttatgtcggtgctgatcttgctgctctctgtacc
gaagctgcactacagtgcatcagagaaaagatggatgtgatagacttggaagatgaagag
atagatgccgagatacttaactcaatggctgttacagatgagcacttcaagactgctctt
ggaacaagcaacccctctgctctgcgtgaaacagttgttgaagtgcctaatgtcagctgg
caagacattggaggtcttgacaatgtcaagagagagcttcaagagacggttcaatatcca
gtggagcatcctgagaaatttgagaagtttggtatgtctccttctaaaggagttctgttc
tatggccctcctggatgtgggaaaaccttattggctaaagcaattgccaatgaatgccaa
gctaactttatcagtatcaagggtccggagcttctcaccatgtggtttggggagagtgag
gccaatgttagagaaatttttgacaaggccagagggtcagcaccttgtgttctcttcttt
gatgaacttgattccattgccacccagagaggaagcagtgtcggagatgcaggtggtgct
gctgatagggtacttaaccagcttttgactgaaatggatgggatgtcagcaaaaaagacc
gtcttcatcattggtgctaccaacaggcctgatatcattgatcccgcacttctgaggcca
ggacgtcttgatcagttgatctatattccattgcctgatgaagcctctcgtttccagatc
ttcaaggcctgcctaaggaaatcacctattgctaaggatgttgacctttcagcccttgcc
aagtacactcaaggatttagtggagcagatattactgagatatgccagagagcttgcaag
tatgctattagagagaacattgagaaagatatagaaaaggaaaggagaagaagtgagaat
cccgaggcaatggaagaggatgttgatgatgaagtggcagagatcaaggctgcacatttt
gaggagtcgatgaaatatgcacgcagaagtgtgagtgatgctgacattcgcaagtatcag
gccttcgctcagactttacagcagtccaggggtttcggatctgagttccgatttgctgat
gcatcaggagcagcaacagggaccactacctcaggtgctgctgatccttttgcagcttct
gctggtgccgacgatgaagacgacttgtacagttag
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