Papaver somniferum (opium poppy): 113298753
Help
Entry
113298753 CDS
T05758
Name
(RefSeq) polyadenylate-binding protein 7-like
KO
K13126
polyadenylate-binding protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113298753
09123 Folding, sorting and degradation
03018 RNA degradation
113298753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113298753
03041 Spliceosome [BR:
psom03041
]
113298753
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113298753
mRNA cycle factors
Stress granule specific factors
113298753
Spliceosome [BR:
psom03041
]
Complex C
Other components
Complex C specific factors
113298753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
Nup35_RRM_2
RRM_occluded
RRM_RdRP1_2
RRM_5
RRM_Nup35
RRM_MARF1
PABC_AtC3H46
HOATZ-like
Motif
Other DBs
NCBI-GeneID:
113298753
NCBI-ProteinID:
XP_026403362
LinkDB
All DBs
Position
7:complement(151235475..151239327)
Genome browser
AA seq
647 aa
AA seq
DB search
MAATPTMTASHTSPSPSSTNVAVTIQVPASLYVGDLHVDVTDSHLDELFSRLKNFASARV
CRDSATGRSLGYGYANFITPEDAIRAIEKTNHTLLNGKSIRVMWSNRDAEVRKSGIGNLF
VKNLNDSIDNVRLQEVFSEFGNIMSCKVAMSQDGKSKGYGFVQFESEESANQALEKLNGS
TVEGKQIYVATFVKKSDRALPSHDSNYTNLYMKNLDLELTEEQLQEKFSVFGKITNLIVT
KDNNGKSKGFGFVNFEIPEDAKRATEAMNGTQLGSKVIYVGRAQKRSERDQILRRQYEEK
RKEQIQKYKGSNVYVKNIEDGVDEDELREHFSQCGTITSVKLMRDDKGICRGFGFVCYST
PEEANKAVSTFHGYMLHHKPLYVAIAQRKEDRQAQLQLQYGQRMAGLSGSSAAVIPAGYS
PLYYTPPGVIPQMPPRQGLMYQPLGMRPGWRANGFLPSARPTFQPVPLHMMPGAPRPHRH
NRGRMTGPMYSPAGVPFRPHLQHQPTQATKDSNNPQRPGQAKYVPNGRQHEMNNGSAASD
AGSQGGLEMLSSMLAAASPQHQKQILGEYLFPLVQNLEHELAAKITGMLLEMDNSELLLL
LESPESLAAKVDEAVQVLKLFKAKAAAGNGQEVIHSNNFLSTEVAVN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactcctacaatgacagccagtcatacttcaccatccccttcttctacaaac
gtagcagtaactattcaagttcctgcatcactttatgttggtgatctgcatgtcgatgta
actgattcacatttggatgagttattctctaggttgaagaattttgcttccgctcgggtt
tgtagagattctgcaactggacgatctcttggttatggttatgctaatttcattactcct
gaagatgcaattcgggcaattgagaagactaatcacactttactgaatgggaaatcgata
agggttatgtggtctaatcgtgatgcagaagtcagaaagagtgggattggtaatttgttt
gtcaagaacttgaatgattcaattgataatgtgaggcttcaagaggtgttttcggagttt
ggtaacattatgtcttgcaaagttgcaatgtcccaagatgggaagagcaaaggatatggc
tttgttcagtttgagtcagaggaatccgcaaatcaagcccttgagaagcttaatggctcc
actgttgaaggcaaacaaatatatgttgccacctttgtgaagaaaagtgatagggcttta
ccaagccatgattctaactatactaacttatacatgaagaatctggatcttgaattgaca
gaagaacaactccaggagaagttctctgtgtttggaaaaattactaacttgattgttacc
aaggacaacaatgggaagtcaaagggttttggatttgtcaactttgaaatccctgaagat
gcaaaacgggcaacagaggcgatgaatggaacacaactaggttcgaaagtcatatatgtt
ggacgtgcacaaaagcgatcagagcgagaccaaattttacgtcgccagtacgaggaaaag
cgcaaggagcaaatccaaaaatataagggttcaaatgtatatgttaagaatatcgaagat
ggagttgatgaggatgaactccgtgaacattttagccagtgtggcacaattacttctgta
aagctgatgcgtgatgataagggaatatgtagaggctttggatttgtttgctactctact
cccgaggaagccaacaaagcagtaagcaccttccatggatacatgcttcaccacaagcct
ctttatgttgccattgctcaacgtaaagaggacagacaagcacaattgcagctgcaatat
gggcagagaatggcaggattatcaggatcctcagctgctgttatacctgctggatattct
cctctatactacacacctcctggtgttattccacaaatgcctccaagacaggggctaatg
tatcaacctttaggtatgagaccaggatggagggccaatggatttcttcctagtgccaga
ccaacattccagcctgtgccacttcacatgatgccaggtgctcctagaccgcacaggcac
aacaggggtaggatgacagggcctatgtattccccggctggtgtaccatttaggccacat
ttacaacaccaacccactcaagcaacgaaagactcgaataatccccagcggcctggtcag
gccaagtatgtaccaaacgggcggcagcacgagatgaacaatggatctgctgcttctgac
gctggttcacagggtggattggaaatgttgagtagcatgcttgctgctgcttcccctcag
caccaaaaacagatacttggggagtatctcttcccactcgtccagaaccttgagcatgaa
cttgcagcgaaaataactggaatgctcctagagatggacaactcagaattgttattatta
ttggaatcgccagagtcattggcagctaaagtagacgaggcagtacaggtgctcaagctc
ttcaaggcaaaagcagctgctggaaatggtcaagaagtcatacattccaataacttttta
tccaccgaggttgcggtcaattaa
DBGET
integrated database retrieval system
