KEGG   Papaver somniferum (opium poppy): 113298775
Entry
113298775         CDS       T05758                                 
Name
(RefSeq) DNA repair protein RAD5A-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
psom  Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:psom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psom03400]
    113298775
DNA repair and recombination proteins [BR:psom03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    113298775
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 ResIII RING_XB3-XBAT31 zf-RING_5 zf-RING_4 zf-ANAPC11 UBA_Rad5
Other DBs
NCBI-GeneID: 113298775
NCBI-ProteinID: XP_026403384
LinkDB
Position
7:152106500..152118693
AA seq 1040 aa
MGNSKVTEELMMTVRSVIGEGFSDMDIIRALHMAKNDVTAAINIIFDVPDFSNNKERVEN
GKNPETSMRSSNEEIRTTNVVVKPNLLETDVIGNPNLFPVSRNVRDSQVGEKLKFGDGSE
WWLIGSTELAGLSTCKGRKLKVGEEVEFSFPFKKPSSPSSSSTSKVFGKGKQTASACSEI
VRFSTKDSGEIGRIPNEWARCLFPLVKDKKVRIEGRCKFSPDVLAIMDSILLSVSVYING
SMFRKCHQTSLKATRTSAEESVVHPLPNLFRLLGLTPFKKAELTPEDLYTRKRPLNLKDS
SGSQTSILNSDKSKKPSPQGSEDENEHVSVSDSDLDNIVGTGDSSQLEETDPPTTLQCDL
RSYQKQALRWMIQLEKGGCVEKASTTLHPCWDAYRLADKRELVVYLNSFSGDATTEFPST
LQMSRGGILADAMGLGKTIMTIALLLAHPGRGGLSNGHLTVQDSGETNESSLSDQSPSST
QKVKKFSGFDKLMKPKESLVSGGSLIVCPMTLLGQWKAEIETHSKSGSLSIYVHYGQSRP
KDAKLLAQNDVVLTTYGVLASEFSAEGEENGGLYSVRWFRIVLDEAHTIKSSKSQVSVSA
SALTADCRWCLTGTPIQNNLEDIYSLLRFLRVEPWGTWGIWNKLVQKPYEEGDERGLKLV
QSILRPIMLRRTKSSTDREGKPILVLPPADVQVIYCELTAAEKDFYDALFKRSKVKFDQF
VEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLAKRFLRGGQDAVQGE
SPDAPSRAYIQEVVEELRKGDKGECPICLEAFEDAVLTPCAHRLCRECLLASWRNHTSGL
CPVCRKTVNKQDLITAPTDSRFQIDIEKNWVESSKVVILLRELENLRASGSKSIVFSQWT
SFLDLLQIPLSRSNISFVRLDGTLSQQQREKVIKQFSEENDIMVLLMSLKAGGVGINVTA
ASNAFVLDPWWNPAVEEQAVMRIHRIGQTKNVTIRRFIVKGTVEERMEVVQARKQRMISG
ALTDQEVRTARIEELKMLFT
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgggaaacagcaaggtcacagaagaattaatgatgacagtacgatctgttatcggtgaa
ggtttttcagatatggatatcatccgggctcttcatatggcaaagaatgatgtaacggct
gcgattaatataatctttgatgtgcctgattttagtaacaacaaagagagagtagagaac
gggaagaatcctgaaacatcgatgcgcagttcaaatgaggagattagaactactaatgtt
gtggtgaaacctaatttgttagaaactgatgtgattggaaaccctaatttgtttcctgtg
agcagaaatgtcagggattctcaagtaggtgagaaattgaagtttggtgatggaagtgaa
tggtggttaattggtagtactgaacttgctgggttatctacatgtaaaggaagaaaactc
aaagtaggggaggaagtagagttttcttttcctttcaagaaaccgagttccccttcctcc
tcttcgacaagtaaggttttcggtaaaggaaaacaaacagcttctgcttgctcagagatt
gtaaggttttcaacaaaagattcaggagagattggtcggattccgaatgagtgggcccgt
tgtctctttccattagtgaaagataagaaggttcggatcgagggacgctgtaaattttct
ccggatgttcttgccatcatggactctattcttttgtcagtcagtgtgtacatcaacggt
tcaatgttccgtaagtgccaccagacttcactcaaggcaacccgcacttctgcggaggaa
tcggttgttcatcctcttccaaatttgtttaggttgcttgggttaaccccttttaaaaag
gcagagctcactcccgaggatctttatactagaaagcgaccattaaacttgaaggatagt
tctggatcacaaacatcaatattaaacagtgacaaatctaagaagccatctccccaagga
agtgaagatgaaaatgagcatgtatctgtttcagattcagatttggataatatcgttggg
acaggggacagctctcagctagaggaaacagatcccccaactacccttcagtgtgatctg
cggtcctaccagaaacaagctcttcgttggatgatccagctggaaaaggggggatgtgta
gagaaggcctctaccaccctccacccatgttgggatgcttatcgtcttgcagacaagagg
gagcttgttgtctatttgaattcgttttcaggtgatgctacaacagaatttcccagcact
ctacaaatgtcaagaggaggtatcttggcagatgctatgggtcttgggaagaccattatg
actatagcactgcttcttgctcacccagggagaggtggattatctaatggccacctcaca
gtccaggattctggtgaaacaaatgaaagcagtttgtcggatcaatctccaagttctaca
cagaaagttaaaaagttctctggttttgataaactcatgaaacccaaggaatcccttgtt
agtggtgggagtttgattgtttgccccatgacccttctagggcagtggaaggcagaaatc
gagactcatagcaaatctggatctttgtctatttatgttcattatggacaaagtagacca
aaagatgcaaagctactggcgcagaatgatgttgtccttactacttacggcgtattagct
tcagagttttcagccgagggtgaagaaaatggtggattatattcagtccggtggttcaga
attgtgcttgatgaagctcatacgataaaatcttctaagagccaagtttctgtttcggca
tctgctttaactgctgattgtcggtggtgtcttactggaactcctatccagaataactta
gaggatatctacagccttcttcggttcttgagggtagaaccttggggtacctggggaata
tggaacaaattggttcaaaagccctatgaggagggtgatgaacgaggattgaagttggtc
caatccattctaagaccaatcatgttgaggagaacaaagtccagcacagacagagaggga
aagccgattcttgttctccctccagcagatgttcaggtgatctactgtgaactcacagca
gctgaaaaggatttttatgatgctttatttaaaagatcaaaggtgaagtttgaccagttt
gttgagcaagggcgggttctgcataattatgcatccattttggagttgcttttgcgtctt
cgacaatgttgtgaccatccgtttcttgtgatgagccgtggtgatactcaagaatactca
gatctaaataagcttgccaaacgtttcctgagaggaggtcaggatgcagtacaaggggaa
tctcctgatgcaccatcaagggcttatatccaggaggtggtggaagagctacgcaaggga
gacaaaggagagtgtccaatatgccttgaagcttttgaagatgctgtgttgacaccttgt
gctcatcgattgtgtcgggaatgtcttttggccagttggcgaaaccatacttctggtctt
tgtcctgtttgtaggaagacggttaacaagcaagatcttattacagctccaaccgatagt
cgcttccagatcgatattgagaagaattgggtggaatcgtcgaaagtagtgatccttttg
cgtgaattggaaaatctgcgtgcatctggctccaaaagtattgtttttagtcagtggact
tccttcttggaccttctgcagattcctctttctaggagtaatatttcttttgttcgtttg
gatgggactctaagtcagcaacagcgagagaaagtaataaagcagttttcagaggaaaat
gatataatggtattgctgatgtctttgaaggctggtggagttggaataaacgtaacagca
gcctcaaacgccttcgttttggatccttggtggaatcctgcagtcgaggagcaagctgtc
atgcgaattcatcgcataggtcagaccaaaaatgtaaccatcagacggttcattgtgaag
ggaacggttgaggaaagaatggaagtagtacaggcgcgtaaacagcgtatgatatctggt
gctttaactgatcaggaagtccgtactgctcgtatagaggaactaaaaatgcttttcacc
tga

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