Papaver somniferum (opium poppy): 113298988
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Entry
113298988 CDS
T05758
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1-like
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
113298988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113298988
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
113298988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Pkinase
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF12
WD40_like
Beta-prop_IFT140_1st
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
113298988
NCBI-ProteinID:
XP_026403689
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Position
7:165797462..165810241
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AA seq
1061 aa
AA seq
DB search
MENRREKMVNAAEGEQFKRKESDPSLKPNDLDTMVSRGIFTSGNNWLENIPQPFTDHAGD
RDTISIAGSEIPYTSLYPVNDAGVMVEELTLKKYKSSQLSVVGGSHGMEGTQSRARSSSN
VMERTQSRPRSWQYLYQLSGGSRNGRMDRVCMSKDKEPVMLSGVEDVGNGFWVRTPQFLT
QSNQGEAEISGHLINKEKKMVSNCQLTVRGEVEKEKELSSRYLEPYDCGYAVGIKDQEKE
DGACVIEKSSDVSLNLRAKTSDPALKSSDASLTSSAAHGMVHDGISLRDWLKHGKWKSNK
SESLNIFKQIVELVDLAHSQQVPLDVRPSSFMIFPSHQVKYAGAIARRDWLDSIVNQGKP
SSENHSSRKRYLECAHYNSSAISKSQKGSKSIKFGQPHPLLPVGYVFKSETDKEVDISSG
TQEYGSHTGEKSKLPIRTQDKSVSTSVSYTAPQQLTSPNFQLEEKWYASPEELHGSRPTL
LSNIYSLGVLLFELLCWFESSEVHAAAMLDLRHRILPPKFLSESPKVAGSCLWLLHPEPS
SRPTTRVILHSELIFEFEDLSSKCHSPSSFDEDDVESDLLLHFLATLKEEKVKQASKLVE
EIGCLEADFKEVEMRYMLGADIFLSEPHKKSKAGEELNQKESRGSEALCMLSPSSKMKEG
RLMSNINQLENAYFSMRSQIELSETDSSTRADIDLLNKAQNENEEPLPKQKTIDHRLGSF
FYGLCKYARYDKLELRATLRSSDLLNSSNVICSLGFDRDEEYFAAAGVSKKIKIFEFNAL
LNDSVDIHYPVVEMSSKSKLSCVCWNNYIKNYLASTDYDGVVQLWDVNTGQGIFQYREHE
KRAWSVDFSKVDPTKLASGSDDCAVKLWTINEQKCNSIIKSIANVCCVQFSAHSTHLLAF
GSADYKTYCYDLRYTRIPWCILSGHSRAVSYVKFLSPDTIVSASTDNTLKLWDLNKTSSD
GDSTSACSLSFRGHTNEKNFVGLSVSDGYIACGSETNEVYSYYKSLPMPVTSHKFGSTDS
VTGQETGSDVGQFVASVCWRGKSNMLVAANSIGSIKVLEMV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacagacgagaaaagatggttaatgcagcagaaggtgagcaattcaaaaggaaa
gagagtgatccttctctgaaaccaaacgatcttgatacaatggtttcaaggggaattttt
acgtcgggaaacaattggttggaaaatattcctcagccgtttactgatcatgctggtgat
agagatacgatctctatagctgggtctgaaatcccatatactagcttgtaccctgtgaat
gatgctggcgtaatggttgaagaattgacccttaaaaaatataaaagttcacagttatca
gtcgttgggggctcacatggtatggaaggaactcaaagtagggcgagaagtagctcaaat
gtcatggaaagaactcaaagtaggcctagaagttggcaatacttataccagctttcaggt
gggtctagaaatgggagaatggatagagtttgtatgtccaaggataaggagccagttatg
ttgagtggtgtagaggatgtcggaaatggattttgggttcgaactccacaattccttaca
caatcaaatcaaggtgaagcggagatctctggacatttaataaataaagaaaagaaaatg
gtttcgaactgtcagttgaccgtaagaggggaggtcgaaaaggagaaggagctttcgagc
agatatctagaaccttatgactgtgggtatgctgttggcatcaaagaccaggagaaggaa
gatggagcttgtgttattgaaaagtcttctgatgtgtcactaaatttaagagcaaaaacc
agtgatccggccttgaagtcttctgatgcgtcactaacatcttctgctgctcatggtatg
gttcatgacggaatcagcttaagagattggttgaagcacgggaagtggaaaagtaataaa
tctgagagcttgaatatatttaaacagattgtagagctggtggatttggcacacagtcag
caagttcccttggatgttcgaccatccagtttcatgatttttccatcacatcaagtgaaa
tatgccggtgctatcgccaggagagattggttggatagcatagtgaatcagggtaaaccc
tcctccgagaatcattcgagtagaaaacgatacttggaatgtgcacattacaacagtagt
gcaatctcaaagagtcaaaaaggaagcaagagcattaaatttggtcagccgcatccccta
ttacctgttggatatgtctttaaatctgaaacagataaagaggtggatatcagttctggg
acacaagaatatgggtctcatacaggagaaaaaagtaaactcccaataagaactcaggat
aagagtgtcagtacaagtgtatcttatacggctccgcagcagttgacctcgccaaacttt
caattggaagagaagtggtatgctagtccggaggagctccatggtagcaggccgacattg
ttgtcaaacatctacagtcttggggttcttctgtttgagctgctttgttggttcgagtct
tcagaagtgcatgctgctgcaatgttggatctacgccatcggattcttcctccaaaattt
ctgtcagaaagtcccaaagtggctggctcctgtctctggctccttcatccagaaccttcc
tcacgaccaacaacaagggtaatactacattctgaactaatattcgagtttgaagacttg
tcgtctaaatgtcactcaccgtcatcttttgatgaagatgacgttgaatcggatctactg
ttgcattttctcgcaacactgaaggaggaaaaggtgaagcaggcatctaaattagttgaa
gagattgggtgcttagaagcagatttcaaggaagttgagatgaggtacatgctaggagct
gatatatttctttctgagccacacaagaaatccaaagcaggcgaagaattaaatcagaaa
gaatctcgaggctctgaggcactctgtatgttatcaccgtcttcaaaaatgaaggaagga
agactgatgagcaatattaatcagttagagaatgcatacttctctatgaggtcccaaatt
gagctttcagaaactgattcttccacacgggcggatatagatttactaaataaagcacaa
aatgagaacgaggagccacttccaaaacaaaaaactattgaccatcgcctcgggtcattt
ttttatgggctgtgcaagtatgcccgctatgataagctcgaattacgggctacattgaga
agttcagatctacttaattcttcgaatgtaatttgctctttgggttttgatcgggatgag
gaatacttcgcggctgctggtgtatcaaagaagatcaagatctttgagttcaatgccctt
ttaaatgattcagtcgatattcactatccggtagttgagatgtcaagcaaatctaagctg
agttgtgtttgttggaataattacatcaagaactatttggcttcaactgattacgatggt
gttgttcagctatgggacgtaaatactggtcaagggatttttcaatatagagagcacgaa
aagcgggcttggtctgttgacttctctaaagtagatcctacaaagttagccagtggaagt
gatgattgtgctgtaaaattatggaccataaatgagcaaaaatgtaatagcataatcaag
agtattgccaatgtctgctgcgtccagttctctgctcattcgactcatttgttggcattt
ggttctgctgattataagacctactgctacgatcttcggtatacaaggataccatggtgt
atcttgtctgggcatagcagagctgtcagctatgttaagtttttaagtccagatactata
gtttctgcatccactgataacaccctcaagctttgggacctcaacaaaacaagttccgat
ggggattctaccagtgcttgcagcttaagctttagaggtcatactaacgaaaagaacttt
gttggcttatctgtttccgatggatacatagcatgtggctcagaaacaaatgaggtttat
tcttactacaaatcgcttcccatgccggtcacttcacacaagtttggttcaactgattct
gtaactggccaagagactggaagtgatgttgggcagtttgtcgcaagtgtctgttggcga
gggaagtcaaatatgctcgttgcagccaactctattggaagtataaaagtgttggagatg
gtatga
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