Papaver somniferum (opium poppy): 113299001
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Entry
113299001 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113299001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113299001
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113299001
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113299001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
113299001
NCBI-ProteinID:
XP_026403712
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All DBs
Position
7:complement(166894163..166897896)
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AA seq
312 aa
AA seq
DB search
MELDSIECVSSSDGIDEEEIHQHHFSSKPHTNIFSSVVSPATSVHELLECPVCTNSMYPP
IHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFP
YYSKLKHEAQCNFRPYNCPYAGSECSVVGDIPFLVSHLRDYHKVDMHTGCTFNHRYVKSN
PREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENDSRNYSYSLEVGA
NGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQN
SDAGVCIPNLCS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatagtattgaatgtgtatcatcatcagatggaattgatgaagaagagatc
catcaacatcatttctcatctaaacctcacacaaatattttctcttcagttgtttccccg
gcaaccagcgtacatgagttattagaatgccccgtttgtactaactcaatgtacccgcca
attcaccagtgccacaatgggcatacgctgtgctccacatgtaaaacaagggtgcacaac
aggtgcccgacctgtagacaggaactgggggacatcagatgtctagcattggagaaggta
gctgagtcacttgagctgccttgcaaatattgttccttaggttgcccagaaattttcccc
tactacagcaagctgaagcacgaggctcagtgtaacttcagaccttacaattgcccatac
gctggatcagagtgttccgtcgttggggatatacctttcttagtttcccatctgagggac
tatcacaaggtagacatgcacactggatgcacattcaatcaccgttatgtgaagtctaac
ccgcgcgaggttgaaaatgccacctggatgctaacggttttcaattgctttggccagtac
ttctgtctgcactttgaagccttccagctcggcatggcccctgtgtacatggcattcctc
cgtttcatgggtgatgaaaatgattcccggaactacagctatagtctagaggttggtgcg
aatggtaggaagcttacgtgggagggcactcctagaagcatacgagatagccaccggaag
gtcagggatagccatgatggccttattattcagagaaacatggcacttttcttctccggt
ggggataggaaggaactgaagttgcgtgttactggacgcatttggaaggagcaacaaaac
tcagatgcaggagtgtgcataccaaacctatgtagttag
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integrated database retrieval system
