Papaver somniferum (opium poppy): 113299008
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Entry
113299008 CDS
T05758
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113299008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113299008
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113299008
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
113299008
NCBI-ProteinID:
XP_026403718
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All DBs
Position
7:complement(167084160..167086808)
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AA seq
650 aa
AA seq
DB search
MEEDSDGRSGKARMLIEKATNSVEPEVDPRLVKAIKFVVRSSDSEIKLAVETLMENMKEN
HSQVRYLALFIVDELFMRSKLFRSLFVVKFDLFLSLSIGFRRDLPLPAPAPIATRLRSKA
IEFLEKWNTSFGLHYRQIRLGFDYLKNTLNFQFPNLQANAARIQQERREREIRSKEILLK
KFETLSQNLSSIKDEIQITVEEIRQCLDILRTNEADDIMLDTPEEDEVEDFRCSSLMEIR
LESLRESEKLRETSENKVIFDALRELYKLLITKHLVSVQEWISVLIRVEPEDTSFRDSML
REFIDLQNHLKSVRKTCENSGCALTDSKNDKEEDFWEEGKVEVCGYGSSSTPAKANKDAA
CMSAVITKSNITPRQITDSNASKRLDGEGEDSESNPLRRKLLSEAPVVNWGSSLSNWGSN
WDVLANQRGLELEGHWGRVDYDAVIPAEKIAELNVQASVYKEEHVDIQPCLAPLRKGGVC
QRRDLKICPFHGPVIPRDAEGNPINQVSLAEKEITKMETEEVIARQLAEQAVKNVREREK
DEVKKRVTDRKLLSRAKLANVREHNEVVLRDAAVASTSRSAFVGQDGETQHQTTRSSIKG
KKPSLASMLRKKVTSKDRLSQRLLNTRATVRQLTVGEDSKYREAYPNHQW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacagtgacggccgatcaggtaaagcgagaatgttaatagagaaagcaaca
aattcagtagaaccagaagtcgatcctcgacttgtgaaagctattaaatttgtcgttcgt
tcttcagactccgaaattaaactcgcagttgaaaccctaatggaaaatatgaaagaaaat
cactctcaggtgaggtatttagcgcttttcatagttgacgaattgttcatgcggtcgaag
ctgttcagatctctctttgttgtgaaatttgatctatttttgagtttgagtattggcttc
agaagagatctgccacttcctgctcctgcacctattgctacccgtttacgctctaaagct
attgagttcctggagaagtggaacacttcttttgggcttcattacagacaaattcgattg
gggtttgattatttaaaaaacaccctgaactttcagtttcctaatcttcaggcaaatgca
gctcggatacagcaagagagaagggaaagagagattagatcaaaagagattttgttgaag
aagtttgaaactttaagtcaaaatctctcatcgattaaggatgagattcaaataactgtt
gaagagataaggcagtgtctagacattcttcgtacgaatgaagctgatgacatcatgctg
gatacccccgaagaggatgaggttgaggatttcaggtgctcctccttaatggagattcgc
ctcgagtccttgagagaaagtgaaaagctacgtgagaccagcgagaataaggtgatattt
gatgcattaagggaattgtacaagctcctaataacaaaacacttggtttcggtgcaagag
tggatatctgttcttattagagttgaaccagaagacaccagtttcagagattccatgtta
agagaattcatagatttacaaaatcatctcaagtcggtgagaaagacatgcgaaaattct
ggttgtgctcttacggattcaaaaaacgacaaggaagaggatttctgggaggagggtaag
gtagaagtatgcggttatggaagtagcagcacgcctgcaaaggcaaacaaagatgctgcc
tgcatgtcggctgtcattacaaagtcaaatataacccctagacagattactgattctaat
gccagcaagaggttagatggagaaggtgaagactctgagtcaaaccccctaaggagaaag
cttctgtctgaagctccagtggtgaattggggatcttccttgtctaactggggatcaaac
tgggatgttttggctaaccaaagaggattagagcttgagggtcattggggtagggtagat
tatgatgcggttattccagcggaaaaaattgcggagttgaatgttcaagcaagtgtatac
aaggaagagcatgttgatatccaaccgtgccttgctcctctgagaaaaggaggagtctgt
caaagaagagatttaaagatatgcccatttcatggacccgttatacctagagatgctgaa
ggaaacccaataaatcaagtttcattggcagaaaaggaaattaccaaaatggaaactgaa
gaggttattgctcgacaattagcagaacaggcagtgaagaatgtaagggaaagagagaaa
gatgaagtaaagaagagagtgactgataggaagttgttgagccgtgcaaaacttgccaat
gtgcgtgaacacaatgaagttgttctacgtgatgctgcagttgcgtcaacctcacgctct
gcatttgttggacaagatggggaaacacaacatcagactacaagatcgtctataaagggt
aaaaagccgtcactagcgtctatgctgcgtaagaaagtaacctcaaaagatagattgtca
cagagacttttaaatacgcgtgctacagtaaggcagttaaccgttggtgaagattccaag
tacagagaggcttatccaaatcatcaatggtag
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