KEGG   Papaver somniferum (opium poppy): 113299057
Entry
113299057         CDS       T05758                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113299057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113299057
Spliceosome [BR:psom03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    113299057
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 PRP4 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_Vps41 WD40_like Beta-prop_SPT8
Other DBs
NCBI-GeneID: 113299057
NCBI-ProteinID: XP_026403765
LinkDB
Position
7:171316216..171319991
AA seq 585 aa
MEVDEEETTLNTTTSPSLPQPSAVRSHDNLTSAITTTNLPLLPTLIAPPPPAGVLPIISA
INLAPPLPPQIIPPIAPIPLAPIPRPPVMLPPHPGTAEQNGSDSDSGDEESGPNKSMDYE
ISEESRQVRERQEKIMQDHLLKRRAYALAVPTNDSAVRARLCRLGEPVTLFGEREMERRD
RLRKIMVNLDPEHQDKLFKAHEDEEAANAAAAEDSDGEGPQQYPFYTEGSQELLQARINI
AKYSIVKAALRLERAKRRRDDPDEDFDAEIDWALKQAGSLELDCSEIGDDRPLTGCSFSC
DGEKLATCALNGATRLWSMPRVSRIVAPFKGHTERTTDVAFSPVSSDLLATASADRTAIL
WNTEGRCLRKYEGHLDRLARVAFHPTGKYLATASFDKTWRMWDVETGVELLFQEGHNRSV
YGICFHHDGSLAASCGLDSLARVWDLRSGRSILSLEGHVKPVYGINFSPNGYHLATGGED
NTCRIWDLRKKKSLYIIPAHSNLISQVKFDPQEGYFLATASYDMTAKLWSARDFKPIKTL
SGHESKVSSLDIVGDGQYIATVSHDRTIKLWASRSNGKDRTMDID
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggaagtagatgaagaagaaaccaccttgaataccactacttcgccatcattgccccaa
ccctcagctgtacgctctcatgacaacttaacatccgccatcaccactactaatcttcca
cttcttccaaccttaattgcaccacctcctccagcaggtgttcttccaattatttctgca
attaatctcgccccacctcttcctcctcaaatcattcctccaatagctcccattcccctt
gccccgattcctcgtcctcctgttatgctcccaccacatccgggaacagctgaacaaaat
ggctctgattctgattccggcgatgaagaatctggtcctaataagtccatggattacgag
atatcagaagagagcagacaggtccgagagcgtcaagaaaaaataatgcaggaccacctt
ttgaaaagaagggcttacgctctagccgtaccaactaatgactcggctgttcgtgctcgt
ctttgtcgtcttggcgaaccagtaacgcttttcggcgaaagagagatggaaagaagagat
cgtttaaggaagataatggtgaatttagatcctgaacatcaggataagctttttaaagct
cacgaagatgaggaggctgcaaatgctgctgctgccgaggatagtgatggggaagggcct
caacagtaccctttttacactgaaggatcgcaagagcttttgcaagcgcgaataaacatt
gcaaagtattcgattgtcaaggcagctttgaggcttgagcgtgcgaaaaggaggagggat
gacccagatgaagattttgatgctgagatagattgggccttgaaacaggctggtagcttg
gaacttgattgtagtgaaataggtgatgatcggccacttactggatgctccttctcttgt
gatggagaaaagcttgcaacctgtgctttaaatggagccactagattatggagcatgcca
cgagtaagtaggattgttgctcctttcaagggtcacacagagcggacaactgatgttgca
ttttctcctgtttcatctgaccttttagcaactgcatctgctgatcgaactgcaatcttg
tggaacactgaagggcgttgtttgagaaaatatgaagggcatcttgatcgacttgctcgt
gtggcgttccacccaaccggtaagtatctggcgacagccagttttgataagacttggaga
atgtgggatgttgaaactggagtcgagctgcttttccaagaaggccacaataggagtgtt
tatggtatatgctttcaccatgatggttctctggctgcatcatgtggccttgattcactt
gctcgggtgtgggatcttcgttctggaaggagcatcctttctttggaaggtcacgtgaaa
ccggtatatggaattaacttctccccaaatggctatcatttagccactggtggagaagat
aatacttgtcggatctgggatctaaggaaaaagaagtctttgtacataataccagctcac
tccaatcttatttcgcaagtcaagtttgacccacaagaaggatattttctggcaactgct
tcatatgatatgacagccaagctatggtctgcacgggattttaagcctataaagactttg
tccggacatgaatcgaaagtctcatcgctggatattgttggagatggacagtatattgca
actgtttcacacgatcggactatcaagctgtgggcaagtcgtagcaatggaaaggacagg
acaatggatattgattag

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