Papaver somniferum (opium poppy): 113299068
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Entry
113299068 CDS
T05758
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113299068
Membrane trafficking [BR:
psom04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
113299068
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_RSE1_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
113299068
NCBI-ProteinID:
XP_026403779
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All DBs
Position
7:173302924..173316077
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AA seq
1125 aa
AA seq
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MYMAYGWPQVIPLEPGLCPVSQKIVYIKLINRLLLVVAPSHLELWSCSQHKIRLGKYKRD
SESVQLEGEYVEAVWSPDTKLIALVTSSFFLHIFKVQFTEKRLQVGGKQPSGLFLANINL
VLNEQVPFADKNLAMSNIVCDNKHLLVGLSDGSLQLISWKGEFSGIFELDYRPRDSDDII
QPSQFLENGRSSEGVKRDIAATQVFSNRSAITQLDFSLLLRLLVVLYSDGQLALCSVSKK
GLKQIESIKTERWLDSGDAVCVSVASDQQILAVGSKRGLVELYDLAESASLLRTVSLYDW
GYSMEDTGSVSCIEWAPDNSAFAVGWKLRGLTVWSLSGCRLMCTIRQIGLSSASSPMVKP
NQDFKYEPLMSGTSVMQWDEYGYRLYAIEEGSMERILSFSFGKCCLNRGVSGTTHIRQVI
YSEDRLLVVQSEDTDELKILHLSLPVSYISQNWPVLHVAASKDGMYLAVAGQHGLILYDI
RYKKWRVFGDITQEQKIQSKGLLWLGKIVVICNYVSSSNMYELLFYPRYHLDQSSLLCRK
TLLGKPIVMDVFEDYILVTYRPFDVHIFYVKIMGELSPSNTPILQLSTVRELSIMTAKNH
PAAMRFIPEQHSSEHSSKQNFSSLSDSLVRQPSRCLILRTNGELSLLDLDEGRERELTDS
VELFWVTCGQSEEKANLIEEVSWLDYGHRGMQVWYPSPGVDPFKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPTPQAQTILHCLLRHLLQRKKSEEALRL
ARLSAEKPHFSHCLEWLLFTVFDAEISRQSSSKNQAIPKSTTAFSLLEKTCDLIRNFPEY
HDVVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQY
CALRLLQATLDESLYELAGELVRFLLRSGREYENQNMDSDKLSPRFLGYFLFRSSYKRQS
FDSKSSTSVKEQSAHVASVKSILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERSG
SVRLENFASGLELIGEKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFD
LFRHDMRLWKAYSITLQSQPAFAEYYDLLRVLEEQLSSIPNLEDM
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatacggatggcctcaagtcatccctcttgaacctggactatgtcctgtt
tcacagaagatcgtttacatcaaacttatcaatcgtctcttacttgttgttgctccttct
catttagagctctggagctgttcccagcataagatcagactaggaaagtacaagagagat
tcggaatcagtacaacttgaaggagagtatgtagaggctgtttggagtccggataccaaa
ttgattgcactagtgacgtcttcattcttcctccatatttttaaggttcagtttactgaa
aagagactacaggttggggggaagcaaccttctgggctgtttcttgcaaatattaatctg
gttcttaatgagcaagttccctttgcagataagaatttagcaatgagcaatattgtgtgt
gacaacaaacatcttcttgttggactttcagatggatccttacaacttatatcctggaaa
ggggagttctctgggatctttgaacttgattatcgcccacgtgatagtgatgatatcatt
caaccgtcccaatttttagagaatgggcgatcttcagaaggggttaaaagagacatagca
gctacccaggttttcagcaaccgttctgctattacgcagctggatttctctttgctactg
aggcttctagttgtattatattctgatggacaacttgcactatgttcagttagtaagaaa
ggtttgaagcaaattgagtctattaaaactgaaagatggttggattcaggagatgctgtg
tgtgtttcagtagcctcagaccaacaaatccttgcagttggcagcaaaagagggcttgtt
gagttatatgacttggcagagtctgcttctctgcttcgaactgtgtctttgtatgactgg
gggtattccatggaagacactggttcagtcagttgtatagaatgggcacctgataattct
gcttttgcagttggctggaagttgagaggacttacagtttggtccctttctggttgccgt
ttgatgtgtacaattcgacaaattggtttatcctctgcctcttcgccaatggtgaaacca
aaccaagattttaaatatgaacctcttatgagtgggacctcagttatgcagtgggatgaa
tacggttacaggctttatgctattgaggaagggtctatggagaggattctttccttttct
tttggaaaatgttgtctcaatagaggggtttcgggcacaacacatattcgtcaagtgatt
tacagcgaagacaggttgcttgttgtgcagtctgaagatactgatgaactcaagatactc
catcttagccttcctgtatcttatatctctcaaaattggccggttctacatgtggctgct
agcaaggatggaatgtacttagcagttgctggtcaacatgggcttatactatatgatata
cgctacaaaaaatggcgtgtgtttggagatattacccaagagcaaaagatccagagtaaa
ggcttgttgtggttgggtaaaattgttgttatctgcaactatgtcagctcctctaacatg
tatgagttgttgttttatccaagatatcatcttgatcagagttctctactttgtcggaaa
acattgctcggcaagccaattgttatggacgtgtttgaagattacatactcgttacatat
cggccatttgatgttcatatattttacgtgaaaatcatgggggaactttcaccatctaat
actccaattttacagctttctacagtacgagagctatcgatcatgactgcaaagaaccat
cctgcagctatgcgtttcattcctgagcagcattcaagtgaacattcgtctaaacaaaac
ttttcatccttatctgattctttagtcagacaaccctctagatgtttaattctgcgaaca
aatggggagctttcgttgcttgatttggatgaagggcgtgagagagagctgacagattca
gtagaactgttttgggttacttgtgggcaatctgaagagaaagcaaatctgattgaggaa
gtgtcatggttggattatggccatcgcgggatgcaggtttggtatccgtctcctggtgtc
gatccgtttaagcaggaagatttcttgcagttggatccagaattggaatttgatcgtgag
gtttatcctctgggccttcttccaaatgctggggttgttgtgggtgtttcccaaagaatg
tcattttcagcgtgcacagagtttccttgtttcgagcctaccccccaggctcaaactata
ttgcattgcttactgcgccaccttcttcagaggaagaaaagtgaggaagctttacggtta
gctcgtttatctgcagaaaagcctcacttttcacactgcttggagtggctcctttttact
gtttttgatgctgaaatatccaggcaaagttcaagcaaaaaccaggcaattcccaaaagt
actaccgccttctctcttctggagaagacctgtgatttgatccgaaattttcctgaatat
catgatgtagttgtaagtgttgccagaaaaactgatgggcgacactgggcagatttgttt
gctgccgctggaagatcaacagagttgttcgaggagtgctttcagcggagatggtatagg
actgcagcatgctatatactggtgattgctaagcttgaaggtcctgcagtcagtcagtac
tgtgccctgcgcttactacaggctacacttgatgaatctttatatgaacttgcgggagag
ctggtgaggttcttgctgagatctggaagggaatatgagaatcagaatatggattccgac
aaattatctccaagattcttgggctattttctattccggtctagttacaagaggcaatct
tttgattctaaaagcagtacctcagtcaaagaacagagtgcacatgtcgcttctgttaag
agcatactggaaaaccatgctagctacttgatgtcgggaaaagagctttctaaacttgtt
gcattcgtaaagggtacacaatttgatctggtggagtatcttcaacgggaaagaagtggg
tctgttcgcctagaaaattttgcttcaggacttgaactaattggtgaaaagctgcaaatg
ggtaccctgcagagccgcttggacgctgaatttctgttggcgcatatgtgctctgtcaag
tttaaagagtggatagtcgtcttggctactcttttaaggcgttcggaggttctttttgac
ctttttcgacatgatatgaggttatggaaagcatatagcatcactcttcagtcacaacct
gcatttgctgaatattatgatttgctaagagttttggaggagcaactttcatccatccca
aatttggaggacatgtaa
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integrated database retrieval system
