Papaver somniferum (opium poppy): 113299593
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Entry
113299593 CDS
T05758
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113299593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113299593
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113299593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_HPS5
EIF3I
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_SCAP
NBCH_WD40
PEP5_VPS11_N
Beta-prop_WDR75_2nd
WD40_like
WD40_RFWD3
Beta-prop_LRRK2
VPS8_N
Nbas_N
VID27
Motif
Other DBs
NCBI-GeneID:
113299593
NCBI-ProteinID:
XP_026404433
LinkDB
All DBs
Position
7:complement(218838405..218846475)
Genome browser
AA seq
907 aa
AA seq
DB search
MGIFEPFRAIGYITSNVPYSVQRLGTETFVTVSVGKAWQIYDCAKLTLVLVGPQLPRKIR
ALASYRDFTFAAYGNDIAVYKRAHQVATWSRHGEKVNYLLLFGDHILSVDIKGNLFMWAF
KGIEENLAPVGHILLDQKFTPSCIMHPDTYLNKVIIGSQEGSLQLWNVSSKKKLYEFKGW
NSSICCCVSSPALDVVAVGCADGNVHVHNLKYDEELITFTHSTRGAVTALSFRTDGQPLL
ASGGSSGVISIWNLEKRKLQSVIRDAHDSSIVSLHFFANEPVLMSSSIDNSIKMWIFDTT
DGDPRLLRFRSGHSAPPRCVRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVSKR
AKKLRVKEEEIKLKPVICFDFAEIRERDWCNVVTCHMDTSRAYVWRLQNFVIGEHILTPS
TSERTPIKACTISACGNFAFLGTEGGWIERFNLQSGQSRGSYGDMSESRNYAHDGEVVGV
ACDATNSLMISAGYHGDIKVWDFKGRHLKSRWDVGSSVVKIGYHRANGLLATVSDDMVIR
VFDVVALRMVRKFEGHTDRVTDMCFSEDGKWLLSSSMDGTLRVWDVILARQIDAIHVDVS
ITALSLSPNMDVLATSHVEQNGVYLWVNQAMFSGSSNVDSYASGKKAVSVKLPAVSSNGD
ADNDSDNATGNQSQNKDTVGTPRLDYQIPDLVTLSLLPKSQWQSLINLDIIKMRNKPIEP
PKKPEKAPFFLPTVPTLSGDIVFKPSDSTLEEKKENRDALGNHTRDHNLPASKFLQLLQT
SADTKSFAVFTKYIKDLSPSALDMELRMLQIVDDDDEQEPEKRPEMHFIELLLDYFNHET
SCRNDYEFIQAVIRLFLKIHGETVRCHTQLQAKAKELLEVHSPTWQRIDKMFQSTRCMVS
FFSNAQF
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttttgaacctttcagagctattggttatatcacaagtaatgttccgtattca
gttcagagattgggtactgaaacttttgttactgttagtgttggtaaagcttggcagatt
tacgattgtgctaagctgactttggttcttgttgggcctcaattaccaaggaagattcgt
gctcttgcatcgtatcgtgattttacatttgctgcgtatgggaatgacattgcggtttat
aagcgtgctcatcaggtagcaacttggagtagacatggcgagaaggtcaactatttgtta
ttgtttggagaccacatcttaagtgttgatattaaagggaatctgttcatgtgggcattc
aaagggattgaggaaaatcttgctccagttggacacattttgttggaccagaaattcacc
cctagctgcataatgcatccagatacgtacttaaacaaggtgataataggaagccaagaa
ggttcattacagctttggaatgtcagctcaaagaagaaactatatgagttcaagggatgg
aattcatccatctgttgttgtgtttcatcacccgccttggatgttgttgcagtaggttgt
gcggatggcaacgttcatgtccataatcttaagtatgatgaggagttaattacatttaca
cattctacacgaggtgctgtgaccgccttgtctttcagaacagatggacagcctcttcta
gcatcaggaggttcatcaggtgttataagcatatggaatcttgagaaaagaaagctgcag
tcagttataagagatgctcatgacagttcaattgtatcgctgcatttctttgctaatgag
ccggtgcttatgagttcttcgatagataactccataaagatgtggatctttgatacaact
gatggggatcctcgccttttacgctttcgaagtggccatagcgcacctccacgctgtgta
aggttttacgcaaatggaagacacattctatctgctggtcaggatcgtgcctttcgtctt
ttctctgttattcaggatcaacaaagtagagagctttctcagcgtcatgtatctaaaaga
gccaagaaattgagggtgaaggaagaagagataaaattgaagcctgtaatttgttttgat
tttgctgaaattcgcgaacgtgattggtgcaatgttgttacttgtcatatggatacttca
cgggcatatgtatggaggcttcagaactttgtcattggcgagcatatcctgacaccatca
acgagcgagcgaacacctattaaggcttgcacaatcagtgcttgtggaaattttgctttc
cttgggacagagggtggatggattgagcgttttaatctccaatcaggacagagcagaggt
agttatggtgacatgtctgaaagcagaaactatgctcatgacggtgaagtggtcggggtt
gcttgtgatgctacaaactctcttatgataagtgcgggatatcatggagatataaaggtc
tgggatttcaaggggcgtcatctgaaatctaggtgggatgtgggttcctctgtagttaag
attggttatcacagagcaaatggtctcttagctactgtgtcagatgatatggttatccgt
gtgtttgatgttgtggccttaagaatggttcgaaaatttgaaggtcatacagatcgtgtt
acagacatgtgtttcagcgaagatggtaaatggttattatcatctagtatggatggcact
cttagagtctgggatgttatcttggcaagacagatagatgcaatccacgttgatgtatcc
ataactgcattgtctctttcacccaacatggatgtcttagcgacttctcatgttgagcag
aacggggtctacttgtgggtcaatcaggcaatgttctcgggttcctctaatgtggattca
tatgcgagtggtaaaaaggctgtgagtgtcaaactgccagctgtctcttcaaatggagat
gccgataatgattctgataacgctactgggaaccagtcacaaaacaaagatactgttggt
accccacgtctagattaccaaatacccgatcttgttaccttatcattgttgccgaagagc
cagtggcaaagcttgatcaatttggacattataaagatgcgtaataaaccaattgagcca
cctaaaaagccagagaaagcacctttcttcttgcctacggttccaactctatcaggagac
atagtgttcaagcccagtgattcgactttggaggagaagaaggaaaatcgtgacgcactg
gggaaccacacgagagatcacaatttaccagcttccaagtttctgcaacttcttcaaacc
tctgccgacacaaaaagttttgcagtattcacaaaatacatcaaggatttatctccctca
gctcttgatatggagctccggatgcttcagatcgtagacgatgatgatgaacaggagcct
gagaagagaccggagatgcatttcattgagctgctattggattacttcaatcatgagact
tcctgcagaaacgactacgagttcatccaagcagtgatcagactgtttctgaagattcat
ggcgagacagttcgatgccacacacaactacaggccaaggcgaaggaacttctagaagtt
catagtccaacatggcagagaatagacaaaatgtttcaaagtacaagatgcatggtttca
tttttcagcaacgctcaattttga
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